Oncorhynchus tshawytscha (Chinook salmon): 112227702
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Entry
112227702 CDS
T05605
Name
(RefSeq) vascular endothelial growth factor receptor 1-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112227702
04020 Calcium signaling pathway
112227702
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112227702
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112227702
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112227702
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
112227702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_4
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
112227702
NCBI-ProteinID:
XP_042164585
LinkDB
All DBs
Position
LG29:23841372..23957945
Genome browser
AA seq
1311 aa
AA seq
DB search
MIGYIFVVLCGLVGSALAKGKVDREPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGRWEL
SWAFPGGVARDQERMRLEDSRCGRQSQHYCSQLTLSSAQAQHTGSFRCRYSHRTLRQRAV
YVYVTDRQRPFVGEQNNSPDVVYMKESQPLVFPCRVTNPDATVSLVKFPDQELTPDQRNI
VWNSRQGFLIRSPTYFYIGLFSCKTSVNGTTHSLNYLTHRQVNKIMKVYLNSTSPVQSLQ
GESLAINCTVTAEWNSRVSISWDYPGQANRSAIVSRWIMASKFHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPFIRLKPRQGAEVEAHAGQKSYRLSPKLRAFPAP
EVIWLKDGKVAAEECSRYHVDGNSLVIRDVVEEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSVQDPGSVPRGSRQALHCTSHGVPPPRIAWLWHPCPPKGLCVCPPSSSMW
SPVKERAPGTSTHNHILSVTHRQEVLQGKNKTVGVLMVAEAFVSGVYRCIASSSVGKDEL
DMPFYITDVPGGFSVSQEDEPREGGDLHLTCVANKHLYTNFSWQRVTDPAEATPPTPSLG
GELSSGEATPPTHSLGGELSSGEATLPTPSLGGELSSGEFSDTLSLLLSNLTAGDSGTYR
CSANHLLTGQNTHLDTQVDVTVLEAPVLLQNLSDCSVNISSSVTLSCRAHGVPRPFITWY
KDQHTLLQGSGIVIAQGGENLHIDRITVEDQGLYTCQATNERGSVESSAYIWVHNSSGGL
SLEIPTLTCTCLVATLFWLLLTLFIRKLKKPNSSSAKAEYLSIILDPGEGPLEEQCDRLQ
YDPGQWEFPRDRLKLEKPLGRGAFGKVMQASAFGIDNSTGCRTVAVKMLKEGATPSDHKA
LMTELKILNHIGHHLNVVNLLGACTKAGPLMVIVEYCRYGNLSTYLKSKRDVFLLNKDGK
KRCFEEREGTEEGGKRERTEERGVSKSPLFLEDLISFSFQVSRGMEFLASRKCIHRDLAA
RNILLSENKVVKICDFGLARDLYKDLDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSY
GVLLWEIFSLGASPYPGLNIDEEFCHQLKEGTRMRSPEYSTPEIYSTMLACWEANPSDRP
TFTGLVETLGDLLEARVQQDGKDYIPLGTFLCGGRDPDSSVQRDSTESSLTDLHPHRLIS
LGYMNTRSTATLRTFEELPSKDPPGPDDEQGDSGMVLPSEELKRLKWTSGAKSLTRSFTI
STCRENLVPCMCNDITGLHDDEPPVLPCDCDAEESCSPPPDYNSAFLYPSL
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgattggctatatcttcgtggttctgtgtggattggttggcagtgcgctcgcaaagggt
aaggtggatagggagcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagactctgacaatccactgcaggggtcggtgggagctg
tcgtgggcattccctggaggtgtggccagagatcaggagagaatgcgattggaagattct
cggtgtggtaggcagagccagcattactgcagccaactgacgcttagctcggcccaggcc
cagcacacaggatcgttccggtgtcggtacagtcatcggacgctcaggcagagagctgtc
tatgtctatgtcacagacagacagcggccatttgtgggggagcagaataacagtccagac
gttgtgtatatgaaggagagccagcctctggtcttcccctgtagggtcaccaaccctgac
gccactgtctcattggtcaagtttcctgaccaggagttgaccccagaccagaggaacata
gtgtggaacagcagacagggcttcctcatccgcagccccacctatttctacatcggcctg
ttctcctgcaagacctctgtcaacgggaccacgcactccctcaattacctcacacacaga
caagtgaataagatcatgaaggtatatctgaacagtaccagtccagtgcagtctctacag
ggggagagtctggccatcaactgtactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctggacaggccaacaggtcagccatagtcagtaggtggatcatggcc
agtaaatttcacatggtgttctacagtattctgtccatccccaaactccaccgctctgac
agagggctttatatctgccgagtgaccagtggaccggtcagtcgagagactaacgtatct
gtcacagtctatgaccgtccctttatccgtctgaagcccagacagggggctgaagtggag
gctcatgcaggacagaagtcataccgtctctcccccaaactacgagccttccctgcccca
gaagtcatctggttgaaggatgggaaggtggcagcggaggagtgttcccgttaccatgtg
gacgggaattccctggtgatccgtgatgtggtggaggaggatgctgggaagtacactatc
ctggttggaatccaggaacacagactctaccagaacctaacgctctctcttgtggtcaac
gtgagtcctgggataggggagaaggcagtgtcagtgcaggacccaggtagtgttccgcgg
ggtagcagacaagccctgcactgcacctcccacggagtcccccctcctcgcatcgcatgg
ctctggcacccctgcccccccaaaggcctgtgtgtgtgtcccccgtcctcctcaatgtgg
agccccgtaaaagagagggcccccggcacttccacacacaaccacatcctgagtgtcaca
cacagacaagaagtcctccaggggaagaataagaccgtgggggttttgatggttgctgag
gcgtttgtgtccggcgtgtatcgctgtattgcctctagttctgtgggcaaggatgagctg
gacatgcctttctatataacagacgtcccaggaggcttcagtgtgagtcaggaggatgag
ccaagggagggaggagacctacacctcacctgcgtagccaataagcacctgtacaccaat
ttttcatggcaacgggtgactgacccagcagaggccacacccccgaccccctccctgggt
ggtgaactgtcctcaggagaggccacacccccgacccactccctgggtggtgaactgtcc
tcaggagaggccacactcccgaccccctccctgggtggtgaactgtcctcaggagagttt
tctgacactctgagtctattgcttagcaacctgacggcgggggattctggaacctaccgc
tgctccgccaatcacctgctgacgggacagaacacacatctggacacacaggtggacgtc
acagtactggaggctccggtgctgttacagaatctgtctgactgcagcgtgaacatcagc
agctcagtgacactcagctgccgcgcccacggagtgccacgcccattcatcacatggtac
aaggaccaacacacactgcttcagggatcaggtatcgtcatagcacaaggaggcgagaac
ctccacattgaccgaatcacagtggaggaccagggtctgtacacctgccaggcaaccaat
gagagaggctctgttgagagctccgcctacatctgggttcacaactcatcaggtggcctg
tctctggagatccctactctcacctgtacctgtctggtggccactctcttctggctgctt
ctcactctcttcatacgtaaactcaaaaagccaaactcttcgagtgccaaggctgagtac
ctttcaatcatcctggacccaggggaggggcctctggaggagcagtgtgataggctacag
tacgacccaggccaatgggagttccccagagaccgcctcaaactggagaaacctctgggc
cgtggggcctttgggaaagtcatgcaggcgtctgcctttggcatcgacaactctacaggc
tgcaggactgtggctgtcaagatgctcaaggagggggctactcccagtgaccacaaggct
ctgatgacagaactgaagatcctgaaccacatcggccaccacctgaatgtggtcaacctg
ctgggagcttgcaccaaggcagggcctctcatggtgatagtggagtactgtaggtatgga
aacctatccacctacctgaagagcaagagagacgtgttcctgctcaacaaagatgggaag
aagaggtgtttcgaggagagagagggcacagaggaggggggtaagagagagaggacagag
gagagaggtgtctccaagtctcctctgttcctggaggatctcatctccttcagtttccag
gtgtctcgaggcatggagttcctcgcctctcgcaagtgtatccaccgtgacctggctgcc
aggaacattctgctgtctgagaacaaagtggtgaagatctgtgactttggtctggccaga
gacctctacaaagacctggactacgtccgcaagggagacgcaaggctgccattgaagtgg
atgtccccagagtccatctttgacaaggtgttcacgacccagagtgacgtgtggtcctat
ggagttctgctctgggagatattctctctgggagcctctccgtacccaggcctgaacata
gatgaggagttctgccaccaactaaaggagggaacacgcatgcgatccccagagtacagc
accccagaaatttacagcaccatgctggcatgctgggaggctaacccctcagaccgcccc
accttcactggcctagtggaaacactgggagacctgctggaagcacgggttcaacaggat
gggaaggactacattcccctgggcacgttcctgtgtggagggagagacccagacagcagc
gtccagagagactccacagagagctccctgactgacctgcatccacacagactcatcagc
ctaggctacatgaacaccaggagcacagcgacactcaggacctttgaggaactgcccagc
aaggacccgcctggcccggacgatgagcagggagacagcgggatggttctaccctctgag
gaactcaaacgcctcaaatggaccagcggcgccaagagcctcacaaggtcctttaccatc
agtacgtgcagggagaacctggtgccctgcatgtgtaatgacatcactggtctccatgac
gacgagccgcctgtcctcccatgcgactgtgacgccgaggagagctgttcccctccaccc
gactacaactctgccttcctctacccctccctctga
DBGET
integrated database retrieval system
