Oncorhynchus tshawytscha (Chinook salmon): 112228524
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Entry
112228524 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112228524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112228524
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112228524
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112228524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
FUSC
Motif
Other DBs
NCBI-GeneID:
112228524
NCBI-ProteinID:
XP_024249684
LinkDB
All DBs
Position
LG30:25392028..25429898
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AA seq
989 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVSKVNEEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQISGICWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLGTSTSERDSRSGKGPVAEDG
CQTTATETKVEVEEEEEEEKTQHDDSNELSDGDLEVDCLTGDEEVNPLDGSSTSGSSTAT
SNTEENDIDEETMSGENDVEFSGNLEMEEGELPDDVAGAAGGSNHGARCLRRGGGLSSAG
SNNSLLEIDPVILIQLLDLKEHSNVESLWGLQPRPPASLLHSQVQIHSRKDRGERRPQAV
RRGAPDSGVLIRLKAQMAEVRSKMTDVKFQLEARGEARVGPSGRATGEQGPSYHADSDLG
PSRKSTELDLIGKGPGASRHCRSGGKKALSPKQEGSRLGLRRATDGVEKESRGQSGEELS
SDQSLFPRDTPNGSEGALKPHSVHSSPPSLGSSSSCYDSKPCISKHDQEQLYGADLYALG
GLNGISTSTIARPRTQPMGSGLLTDSSLDCDLEETAEVRHSLLSLAEGPSSRPDESEPYC
SNPPLPSPLPRPSMEECYCDGSHLVHKQTVVLLPGMSSDSEIDCDTENEDEVVALEAGDC
RYDAQSLPCAGAQLNSDDLCFSTGENTER
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgttgagagtattgcggaggtgttccgctgtttcatctgtatggaa
aagctgagggatgctcggctctgcccccactgctccaaactctgctgcttcagctgcata
cggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactgcagctg
cgggagttggtgaactgccgctgggctgaagaggttacccagcagctggacaccctgcag
ctctgcaatctctccaaacacgaggagaacgacaaggacaagtgtgagaatcaccatgag
aaactcagtgtgttctgctggacctgtaagaagtgcatctgccaccaatgtgctctgtgg
ggaggcatgcatggcggccacaccttcaagcctctggctgagatctacgagcagcacgtg
tccaaggtgaacgaggaggtggccaagctccgtcgccgcctcatggagctcatcagcttg
gtgcaggaggtggagaggaacgtggaagcagtgcgaggggccaaagacgagcgagtgcga
gagattcgtaatgcagtagagatgatgattgcccgtctcgacaaccagctcaaaaacaaa
ctcatcaccctcatgggtcagaagacctccctcacccaagagactgagctactggagtct
ctcctgcaggaggtggaacatcagctgcgctcctgcagtaagagtgagttgatctccaag
agcccagagatcctgctgatgttccagcaggttcaccgcaagcccatgcagtcctttgtc
accactccagtcccccccgacttcaccagtgagctggttcctgcctatgactcaagcact
tttgttctggccaacttcagcaccctgagacagagggcagatcccgtctatagcccccca
ctccagatatctggcatctgctggagactcaaggtttatccagatggcaacggtgtagtg
cgcggcaactatctgtccgttttcttggaactatctgcaggactccctgaaacgtcaaaa
tatgagtatcgtgtggagatggtccatcaggcctccagcgaccccactaagaacatcatc
agggagtttgcatcagactttgaggtgggggagtgctggggatacaatcgcttcttcaga
ctggacctgttggccagtgagggctacctcaacatgcagactgacaccctggtcctcagg
tatcaggtgcgttcgccaaccttcttccagaagtgcagagaccagtactggtacatcagc
cagctggagtcagcccagtccagctacatccagcagatcaacaacctcaaagagaggctg
gccattgagctgttccgtaggcaaaagtctcgcagctcgtcccctcctgaccggcgcctg
ggcacctcgacctcggagagagactcccgctcagggaaaggtcctgtggctgaggatggc
tgccagaccactgccactgagaccaaagtggaagtggaagaggaggaggaggaggagaag
acccagcacgatgactccaatgagctgtctgatggggacttggaagtggactgtctgacg
ggggacgaggaggtgaaccctctggatggtagcagcacctcgggcagctccacggcaacg
agcaacacagaggagaacgacatcgacgaggagaccatgtctggagagaatgatgtggag
ttcagtgggaacctggagatggaggagggagaactgcctgacgatgtggcaggggcagca
ggaggctctaaccatggggccaggtgtctgaggcgtggtggaggtctctcatccgctggc
agcaacaacagtctgctggagattgacccagtcatcctcatccagctactggacctgaag
gaacacagcaacgtggagtcactatggggccttcagcccagaccccctgcttccctgttg
cacagccaagtccaaatccactccagaaaggaccggggcgagcgccggcctcaggcagtg
aggaggggagccccagactcaggggtcctgatccggctcaaggcccagatggctgaggtg
cgcagtaagatgacggatgtcaagtttcagctggaggcgcggggggaggccagggtagga
ccctctggcagagccacaggtgaacaggggccctcttaccatgcagactcagacctaggg
cccagcagaaagtccacagagttggatctgattgggaaaggacctggggcctccagacac
tgtcgctctggagggaagaaggccttgtctcccaagcaggagggcagcaggctgggcctg
agaagagctacagacggagtggagaaggagtcaagaggccagagcggtgaagagttgtcc
agtgatcaaagcctcttccccagggacacccccaatggatcagaaggagccctgaagcca
cacagcgtgcacagctcccctccttctctgggcagctcatcgtcatgctacgacagcaag
ccctgcatttccaaacacgaccaggagcagctctacggggccgacctgtacgctctgggg
ggcctcaatggcatctccacctccaccatagcacgacccaggacccagcccatggggtcc
ggcctgctgacggacagctctctggactgtgacttggaggagacggctgaggtccgccat
tcactgctctccctggcagagggaccctcttcacgccctgatgaaagtgagccgtactgc
tctaacccccctcttccttcacctctacctcgaccctctatggaggaatgctattgtgac
ggcagtcatcttgtccataaacagacggtggtgctgctgccaggtatgagcagtgacagt
gagatcgactgtgacacggagaacgaagatgaggtggtggccctggaggctggagactgt
cgctatgatgcccagtcactgccctgtgcaggggcccagttgaactctgacgacctgtgc
ttcagcacaggagagaacaccgagaggtga
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