Oncorhynchus tshawytscha (Chinook salmon): 112228595
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Entry
112228595 CDS
T05605
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112228595
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M10
112228595
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Metallopep
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
112228595
NCBI-ProteinID:
XP_024249816
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Position
LG30:complement(19340445..19345354)
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AA seq
473 aa
AA seq
DB search
MKTFNLCLLLINLAIVVHSLPISPPSEEDEALAETYLKRFFNLTEETGPVFKRGPSQRSR
KVSEMQSFFGLQVTGTLDAETVMMMKKPRCGVPDVQLSRFTTFDNRKWQTNQVTYRIENY
TPDMTVAEVDNSIERALQVWAKVSPLRFTRIYSGIADIMISFGTRNHGDSYPFDGPDGTL
AHAFSPGADIGGDAHFDDDESFSFSSTRGYNLFLVAAHEFGHSLGLSHSTDPGALMYPVY
SYTDPSTFSLPRDDVNGIQHIYGPNTDVNPKPDKPDPTPPSTPNACDPTLVLDAVTTLRG
EKMFFKGRFFWRSYSQNSEPQQSLIKNYWPELPDNINAAYESQLSDRVFLFKDSQVWALY
GYDIVPGYPRNLKSLGLPSTVNKVDAALYDEDSRKTLFFVGDNYYSYDEAKKRMDIGFPK
RVDEGFPGMTSKVTAAFQVRGFTYLYSGSYMFEYSMRTRRQLRVLRNNYFLPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcaatctgtgcttactactaatcaacctggcaatagtggttcactctttg
ccaatctcgccacctagtgaagaagatgaagcccttgcagagacgtacctgaagaggttt
tttaacctgacagaggagacgggtcctgtgttcaaacgggggcccagccagcggagcagg
aaggtcagcgagatgcaaagtttctttggcctccaggtgacaggaaccttggacgctgag
actgtgatgatgatgaagaagccacgctgtggggtacctgatgtccaactcagccgcttc
accaccttcgacaatcgcaagtggcagaccaaccaggttacctacaggattgagaactac
acccctgacatgactgtggctgaggtggacaactccatagagagagcactgcaggtgtgg
gccaaggtctcccccctgaggtttacccgcatctacagtggcatcgctgacatcatgatc
tcattcggcaccagaaatcatggtgattcttacccctttgatggccctgatggcaccctg
gcccatgccttctcccccggcgctgacattggaggagatgctcattttgacgatgacgag
tccttcagcttcagctcaaccagagggtacaacctgttcttggtggctgcccatgagttt
ggccattccctcggtctcagccactccaccgaccctggagcactgatgtacccagtgtac
agctacacagaccccagcaccttctctctgccccgcgatgacgtcaacggtatccagcac
atctatggtccaaacacagatgtgaaccccaaaccagacaagccagatcctacacccccg
tccacccctaatgcctgtgaccccaccctagttttggatgctgtcaccactctacgtggg
gagaagatgttcttcaagggcaggttcttctggcgtagctactctcagaacagcgaacca
caacagagcctcatcaagaactactggcccgaactccccgacaacatcaatgctgcttat
gagagccagctatctgacagagtgttcctcttcaaagatagtcaggtctgggctctctac
ggctatgacatcgtccccggttatcccagaaacctgaagagcttgggcctgcccagtacc
gtgaataaagttgacgccgccctgtacgatgaagattctcgcaagaccttgttctttgtt
ggcgacaactactacagttacgacgaggcaaagaaaaggatggacataggtttccccaag
cgtgtggatgaagggttcccaggcatgacaagcaaagtgactgcagccttccaagtccga
ggctttacctacctctatagtggctcctatatgtttgagtacagcatgaggaccaggaga
cagttacgcgtgctaagaaacaactacttcctgccctgttag
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