Oncorhynchus tshawytscha (Chinook salmon): 112228884
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Entry
112228884 CDS
T05605
Name
(RefSeq) transforming growth factor beta-1 proprotein
KO
K13375
transforming growth factor beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04060
Cytokine-cytokine receptor interaction
otw04068
FoxO signaling pathway
otw04110
Cell cycle
otw04148
Efferocytosis
otw04218
Cellular senescence
otw04350
TGF-beta signaling pathway
otw04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112228884
04350 TGF-beta signaling pathway
112228884
04068 FoxO signaling pathway
112228884
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112228884
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112228884
09143 Cell growth and death
04110 Cell cycle
112228884
04218 Cellular senescence
112228884
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112228884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
otw03110
]
112228884
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112228884
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112228884
Chaperones and folding catalysts [BR:
otw03110
]
Intramolecular chaperones
Others
112228884
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112228884
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Growth factors/receptors
112228884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Disaggr_repeat
DUF5717
Motif
Other DBs
NCBI-GeneID:
112228884
NCBI-ProteinID:
XP_024250385
UniProt:
A0A8C8D2I3
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All DBs
Position
LG30:complement(7187753..7195586)
Genome browser
AA seq
381 aa
AA seq
DB search
MRAECLTLVALLALEYVCRNEAMSTCKSLDLELVKRKRIEAIRGQILSKLRLPKEPEIDQ
EGDSEEVPTSLMSIYNITVELSEEQVQTYIPPTRDAEEEAYFAKEVHKFNMKQSENTSKY
QMLFNMSEMRSVLGTDRLLSQAELRLLIKNRGMHDSSEQRLELYRGTGDKARYMKSHFVS
KEWANRWVSFDVTQTLREWLKGAGEEQGFQLKLPCECGKAMEEFLFEISGMNKPRGDKET
LFMNMPKPHILLMSLPVERHSQLSSRKKRQSTTEEICSDKSESCCVRKLYIDFRKDLGWK
WIHEPTGYFANYCIGPCTYIWNTENKYSQVLALYKHHNPGASAQPCCVPQVLEPLPILYY
VGRQHKVEQLSNMIVKSCKCS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagaatgtttgacgctggttgccttattggcgctggaatatgtgtgtcggaat
gaagccatgtccacctgtaagtcactggacttggagctggtgaagaggaaacgtattgag
gccatccgtggacagatactgagcaagctgcggctgcccaaggagccagagattgaccag
gagggagactctgaggaggtcccaacctccctgatgtccatctacaacatcacagtggag
ctgagtgaggagcaggtgcagacgtacataccgcccactcgggatgcagaagaggaggca
tactttgcaaaggaggtccacaagttcaacatgaaacaaagtgagaacaccagtaagtac
caaatgctcttcaacatgtctgagatgcggtctgtattggggacagatcgactgctctct
caagctgagctccgtctcctcatcaaaaatcgtggcatgcacgacagcagtgagcagagg
ctggaactctacaggggcactggagataaggcacgttacatgaagtcccattttgtctca
aaggaatgggccaatcgctgggtctcctttgatgttacacagactctgagggagtggctg
aaaggggctggagaggagcaaggattccaattgaagttgccttgtgaatgtgggaaagca
atggaagaattcctctttgaaatatcagggatgaacaagccaaggggagataaagaaact
ctcttcatgaacatgccaaagcctcacattttactgatgtcacttcctgtggaacgccac
agccagcttagctctcggaagaaacgacaaagcactactgaagagatctgctcagacaaa
tcggagagttgctgtgtgcgaaagctttacattgacttccgtaaggacctgggctggaaa
tggatccatgaacccactggctactttgctaactactgcattggcccatgcacctatata
tggaacacagagaacaagtactcccaggtactggctctgtataagcaccacaatcctgga
gcctctgcccaaccttgctgtgttccacaggtcttggagcccctacccattctctactat
gtgggtagacaacacaaggtggagcagttgtccaatatgattgttaagtcctgcaagtgt
agctag
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