Oncorhynchus tshawytscha (Chinook salmon): 112229054
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Entry
112229054 CDS
T05605
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112229054
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112229054
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112229054
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112229054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
112229054
NCBI-ProteinID:
XP_024250713
UniProt:
A0AAZ3QF07
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All DBs
Position
LG30:148162..180680
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AA seq
1036 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPRSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPREEWEMWHPTL
IAEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTHNRLCGRDHPSPDNPRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSS
SEATQQDEANEEEGAGQAQGQSRDQGAKEVSFSTSIAERKSKDSGFSVSALFKSMSGAVD
NKPKCNGLRFSSSPPPSAALTRSSGRLQRFSKSKRDSIRQLGLLFSRMNGHVPEPRSPPP
RMHQPTYSISGGLLRQPTNWPDIQIPPNPPVTHSLFHLGVNLNELPHAPPQALPLGSPQQ
ANGSDSLLLRPAGHSLPPPGHSLPPLHCASSITASSSRAVLLGSSEDMFEGWIGPCDELD
SSEGGAEQEDSITTQL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgttgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtac
ctgacggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtgaactgcctggacccgctggggcgcagtgcgctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccatggcgtgcacgtg
ggcgacgcactgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctg
tcccatcgcaggtccagcagagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgag
atcatcaagctgctggtccagcgcaaggtgaccatcccccggccccaccagatccgctgc
gactgcgtggcctgtgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgc
ctcaacgtctacaagaccctggccagcccttccctcatcgccctgtccagcgaagacccc
atcctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaatgag
ttccgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagt
gaggagctagacccacaggactgccgtgacctggccaagctcaaactagctatcaagtac
caccagaaagagtttgtgtcccagccaaactgtcagcagcttctggccaccctgtggtac
gacggtttccccgggtggcgcagacgccactgggcggtcaagctggtcacctgcttcacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccctaggagtgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgccacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggcggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccaccatctcactcaaaatagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctg
atcgccgagggcctgtttgctatcgccaacatcttcagctccctccgcctcatctccctg
ttcacagccaactcccacctggggcctctgcagatctctctgggacgcatgttgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgtgagaagcagaacaacgccttctctacgctgtttgagacgttacagtccctgttc
tggtcgatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctatcagctcatcgctgatcatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagttattttgacgagggaggaact
ctccctccgcccttcaacatcgtccccagccccaagtcagtatggtacctgtgtgtgtgg
acgcacaaccgcctgtgtggacgggaccatcccagtcctgacaacccgaggaaacacgag
aacctaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcag
gaggtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaaaaca
gacgagggtctgacagaggagaattttaaggagctcaagcaggacatctccagtttccgc
tacgaggtgttagacctgttgggggacaggaagcctccgcggaggacctactcatccagc
agtgaggctacccagcaggacgaggccaacgaggaagaaggggctggacaggcccagggt
cagtccagggaccaaggggctaaggaggtgtccttcagcacgtctatcgctgagaggaag
agcaaggactctgggttcagcgtctccgccctctttaagtccatgtcaggggcagtggac
aacaaaccaaagtgcaacgggctcaggttctcctcctcccccccgccctctgctgcgtta
acccgcagtagtggccggctgcaacgcttctccaagtccaaaagagactccatcagacaa
ctgggcctgctcttctcccgcatgaacggacacgtcccagagcccagatcccctcctccc
aggatgcaccagcccacctacagcatctcaggcggtctgcttcggcagcccacaaactgg
ccggacatccagatcccccccaatcccccggttacacacagcctgttccacctgggggtg
aacctgaacgagctaccacatgcccctccccaggccctgccattggggtcaccccagcag
gctaacggaagtgacagtctgctcctgcgacccgcgggacactccttaccaccgccaggc
cactccctgccacccctgcactgtgcttccagcatcacggcctccagctcccgggctgtc
ctcctgggctctagtgaggacatgtttgagggctggataggaccttgtgacgagctggac
tcctctgaggggggggctgagcaggaggactccatcacaacacagctttag
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