Oncorhynchus tshawytscha (Chinook salmon): 112229688
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Entry
112229688 CDS
T05605
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
otw04814
Motor proteins
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112229688
04820 Cytoskeleton in muscle cells
112229688
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112229688
04261 Adrenergic signaling in cardiomyocytes
112229688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112229688
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
112229688
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
DUF3450
CENP-F_leu_zip
Lebercilin
DUF745
TMF_DNA_bd
PUMA_CC
XhlA
ATG16
SlyX
Crescentin
DUF16
Motif
Other DBs
NCBI-GeneID:
112229688
NCBI-ProteinID:
XP_024251415
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Position
LG31:12672542..12707032
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AA seq
284 aa
AA seq
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MEAVKKKMLMLKLDKENALDAAEQADTDKKAAEERSKQHEDELLQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLLIIEGDHERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcaagaagaagatgcttatgttgaagctggataaggagaacgctctggac
gcggcagaacaagccgatactgacaagaaggcagccgaggagaggagcaagcagcacgag
gatgagttgctgcagatgcaaaagaagctgaagggaactgaggatgagctggacaaatac
tctgaggccttgaaggatgcccaggagaaattggaggttgcggacaagaaggccgcagat
gctgaggctgaagttgcttccctgaacaggcgtatccagctggttgaggaggagttggac
agggcccaggagagactggcgaccgctctgcagaaactggaggaggcagaaaaggctgca
gacgaaagtgagaggggcatgaaggtgattgagaacagggccctgaaggatgaggagaag
atggagctacaagagatccaactgaaagaggccaagcacattgctgaggaggctgaccgc
aagtacgaggaggtggctcgtaagctgctgatcatcgagggggatcacgagcgcacggag
gagagggcagagcttgctgaggctaaatgtgctgaactggaggaggagctgaaaaacgtc
accaataaccttaagtccctggaggcccaggcagagaagtactcccagaaggaggacaag
tatgaggaagagatcaagatcctgactgacaagctcaaagaggctgagactcgtgctgag
tttgctgagaggtctgtggccaagctggagaagaccatcgatgatctggaagatgagcta
tatgcacagaaactcaagtacaaggccattagtgaggagttggaccatgccctcaatgac
atgacctccatataa
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