Oncorhynchus tshawytscha (Chinook salmon): 112229738
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Entry
112229738 CDS
T05605
Name
(RefSeq) integrator complex subunit 3 isoform X1
KO
K13140
integrator complex subunit 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112229738
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112229738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
112229738
NCBI-ProteinID:
XP_024251507
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All DBs
Position
LG31:complement(10125678..10142932)
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AA seq
1042 aa
AA seq
DB search
MEPSPAKGKPQGRLLVSTTLDAKDELEERLERCVGIVTSLTNGLSEREANDAITANVCKG
PQQHEEVCLGLFALLLTEPPQAQRCYRDLTLVNRDGMNVILIKINQILMEKFLKLQDVCR
TQLVWLVRELVKSGVIGADGVLMTLMKQIAGGDITSKNLWLAENVLDILLDQREWVLKSG
MLIAMSVYTYLRLIVDHGTPALLVLRQKEVDLCIGLLREKFMECFIIGRDLVRLLQIVAR
IPEMELLWKDLLHNPQALSPQFTGKGLLQLLTARTSRKFLACRLTPDMETKLLFMTSRVR
FGQQKRYQDWFQRQYLSTAESQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTT
CTSNVAASNAKLALFYDWLFFSPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRII
PHFFPPLEGQVRQGVFNSLTFIMEKRVLAHLAPLFDNPKLDRELRSMLRERFAEFCSSPS
PPTEGRDEGANEMKMEESVSLEMDNHVLLDKEDGCYDNTEAAFSDDEEEVNNKGEGNKKR
EFRFHPIKEAVIEEPADITPYVDQLDDTMKEKVLQLQKGSDTEAHCEVMQEIVDLVLEED
FDSEQMSTLASCLAELFKGHFRGDVLPDDITEESLEESVCKPVCLVFRNLCQMQEDNSGF
SVLLEMLAELYQKQPKIGYHLLYYLRASKAAMGKMSLYESFAQATALGDLHTCLMMDMKA
CQEDDIRLLCYLTPSIYTEVHTNVFYAEFPDETLRSGELLNMIVAVIDSTQLQELMCHVM
IGNLVMFRKDSVLNILIQSLEWETFEQYSAWQLFLAHSIPLETIIPILQHLKYKEHPEAL
SCLLLQLRREKPSGEMVKMVLSRPCHPEDQFTTSILRHWAAKHDDVLGEHIKALLIKNNN
MPRKRQSLRSSSSKLAQLTLEQILEHMDNLRLNLSNTKNSFFTQTPILQALQHVQASCDE
AHKMRFSDLFSLAEEYEEPSSKPPKSRRKAPASSPRSRKGTVTPVSNEEESASSSASEEE
DSKPKAPKRKRKGSSAVASDSD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcaccggcaaaggggaaaccgcagggtcgcttattggtgtccacgaccctg
gacgcaaaagatgagcttgaggagcgtttggagaggtgtgtggggattgtcacttcgttg
acaaatggcctgtcagagcgtgaggccaacgatgccatcacagctaatgtgtgtaagggc
ccccagcagcacgaggaggtgtgtctgggactctttgctctgctgctcaccgagcctcca
caggcacagaggtgctacagagacctgaccctggtgaatagggacggcatgaacgtgatc
ctgatcaagatcaaccagatcctcatggagaagttcctcaagctgcaggacgtgtgtcgc
acacagttggtgtggttggtgagggagctggtgaagagtggcgtgatcggcgcggatggc
gtcctcatgacccttatgaagcagatcgcaggaggagacatcaccagtaagaacctgtgg
ctggctgagaatgttctggacatactgctggatcaaagggagtgggtgctgaagagtggc
atgctgatagccatgtccgtgtacacctacctgcgcctcatcgtggaccacggcaccccg
gcactgctggtcctcagacagaaggaggttgacttgtgtatcggcctgctccgagagaag
tttatggagtgttttatcattgggagagacctggtgcgtctgctgcagatcgtggcccgg
atcccagagatggagctactgtggaaagacctgctccacaacccccaggccctcagccct
cagttcactggtaagggtttgctgcagctcctgaccgctcgcacatcccgcaagttcctg
gcttgtcgcctcacaccagacatggagaccaaactgctcttcatgacctccagggtacgt
tttggccagcagaagcgctaccaggactggttccagagacagtacctgtccacggcagag
agccagtcgctgcgctgtgacctgattcgctacatctgcggcgtggtgcacccatccaat
gaggtgctgagctctgacatcctgccccgctgggctatcattggctggctgctcaccacc
tgcacgtctaacgtggcggcctcgaacgccaagcttgccctgttctacgactggctcttc
ttcagcccagagaaggacagcatcatgaacatagagccggccatcttagtgatgcaccac
tccatgaagcctcatccagccatcactgccacgctcctggacttcatgtgtcggatcatc
cctcactttttcccccctctggaggggcaggtgcggcagggtgtcttcaactctctcacc
ttcatcatggagaaaagagtgctggctcatctagctcctctgtttgacaaccccaaactg
gatcgggagctgcgctccatgctgagggaacgcttcgcagagttctgcagttctccctca
cctcctactgagggaagggatgaaggtgcaaatgaaatgaaaatggaggagtctgtttcc
ttggagatggacaatcatgttctgcttgacaaggaggatggttgctacgacaacacggag
gctgccttcagcgacgatgaggaggaggttaacaacaagggtgagggcaataaaaagcgg
gagttcagattccacccaatcaaagaggccgttattgaggagcccgctgacatcactccc
tacgtggatcagttggacgacacaatgaaggagaaggtgttgcagttacagaaaggaagt
gacacagaggcacattgtgaagtcatgcaggagatagtggacctggtcctggaggaggac
tttgactcagagcagatgtccactctggcctcctgtctggctgagctcttcaagggccac
ttcagaggagacgtactgcctgacgacatcacagaagagtcgctggaggagtctgtgtgt
aaacctgtgtgcctggtgttcaggaacctgtgtcagatgcaggaggacaacagtggcttc
tcagtgctgctggagatgctggcggagctctaccagaaacagcccaagatcggctatcac
ctgctttactacctcagggccagtaaagcagcgatggggaagatgagtctgtacgagtcg
tttgcccaggccacagcgctgggagacctgcacacctgtctcatgatggacatgaaggcc
tgccaggaggacgacatcaggctgctctgctatctcacaccatccatctacaccgaggta
cacacaaacgtcttctacgccgagttcccagatgagacattgcgcagtggagagctactc
aacatgattgtagcagtcatcgattcaacacagcttcaggagctgatgtgtcacgtgatg
attggcaatctggtgatgttccgcaaggactctgtcctcaatatcctcatccagtctctg
gaatgggagacgtttgagcagtacagtgcctggcagctcttcctggcccacagcattcca
ctggagaccattatccccatcctgcagcacctcaagtacaaagaacacccagaagcactc
tcctgtttgctgttgcaactacgcagggaaaaacccagtggtgagatggtgaagatggtg
ctgagtcggccctgccacccggaggaccagttcaccaccagtatcctgcgccactgggcg
gccaagcacgacgacgtcctgggggaacatatcaaggccctgctcatcaagaacaacaac
atgccacgcaaacgccagagtctgcgcagctccagcagtaaactggcccagctgaccctg
gaacagatcctggagcacatggacaacctgaggctgaacctcagcaacaccaagaacagc
ttcttcacacagactcccatcctgcaggcactgcagcatgtccaggccagctgtgacgag
gcccacaagatgagattcagcgacctcttttcattggccgaggagtacgaagagccctcc
tccaagcctcccaagtcacggcgcaaggcccccgcctcctccccgcggtcgcgtaaggga
acggtcacccctgtgagcaacgaggaagagagcgcgtctagcagtgcctcggaggaagag
gactccaaacccaaagcccccaagaggaagaggaaaggctcatctgcggtggcctcggac
agcgactga
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integrated database retrieval system
