Oncorhynchus tshawytscha (Chinook salmon): 112229993
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Entry
112229993 CDS
T05605
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-7-like
KO
K04809
nicotinic acetylcholine receptor alpha-7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112229993
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112229993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112229993
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112229993
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5665
Motif
Other DBs
NCBI-GeneID:
112229993
NCBI-ProteinID:
XP_024251954
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Position
LG31:124628..148118
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AA seq
608 aa
AA seq
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MQIRDIPASESNPPVRASSPLIPVSAALFSDSYPLEMWCSVVLVVCGFSALVQVSVQGPH
QRTLLKNLLKDYNRMERPVGNDSHSLTVFFSISLMQIMDVDEKNQVVTTNIWLRMSWFDH
YLQWNQSEYPGVKNLRFTTDQVWTPDILLYNSADDDFDSTFKTNVLVNSSGFAEYLPPGI
FMSTCNVDVRWFPFDIQKCEMKFGSWTYDGWLMDLQMNEADISGYMSNGEWDLVGVPGTR
SEVFYDCCKEPYPDVTFVVTIRRRTLYYALNLLIPCVLLSSMTLLIFLLPADSGEKISLG
ITVLLSLTVFMLLVAEIMPATSDSIPLIGQYFASTMIIVGMSVIATTVVLQYHHHDPNGG
QMPKWVNVVLLQWVAWFLRMKRPGESDDPERPPCAPHLRRCSSSSQSGSIPNPPDPTLHQ
LHPQNLVPLQAGPQHLGHPHLHAQSSANNNGNLLYIGFQNMDDPPLLPDHIQNYSISAGP
PRVAGSPPPHLPPPFCSPPPPPTPNADTVGCPSTISSGGVFGMGGGGQYSAGRIGDPQLQ
AILEEVRYMADRFREQDETESVADQWKFAAAVIDRLCLVAFSVFNIICTIAILMSAPNFV
EAASKDFF
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcagggatattccagcctctgaatccaaccctcctgtccgtgcctcttctcct
cttatccctgtctcagctgcactcttctccgattcctatccattagaaatgtggtgctct
gtggttctggttgtctgtggattctctgctttggtccaggtgtcggtgcagggccctcac
cagaggaccctgttgaagaacctactgaaggactacaatcgtatggagaggccggtgggc
aacgattcacactccctcaccgtcttcttctctatcagtctgatgcagatcatggatgtg
gatgagaagaatcaggtcgtcaccactaacatctggcttcggatgagctggtttgatcat
tatcttcagtggaaccaatctgaataccctggagtgaaaaaccttcggttcacaactgac
caggtgtggacgccagacattctcctctataacagtgcagacgatgactttgactctacc
tttaagaccaatgtgctggttaactccagtggcttcgcagagtatctccctccagggatt
ttcatgagcacatgtaacgtggacgtacgttggttccccttcgacatccaaaagtgtgag
atgaagtttggctcgtggacgtacgatggctggctgatggatctacaaatgaatgaggcc
gacatctccgggtacatgtccaacggggagtgggacctagtgggagtgccaggtactcgt
agcgaggtgttctatgactgttgtaaggagccctaccctgatgtgacgttcgttgtgacc
atccgccggcgcactctctactacgctctaaacttgctcatcccctgtgtgctgctatcc
tccatgaccctgctcatcttcctactgcctgccgactctggagagaagatctctctgggt
atcactgtgctgctctctctcactgtcttcatgttgctggtggcagagatcatgccagcc
acttcagattccatccctctcataggacagtactttgccagtactatgatcattgttggg
atgtcagtcatagctacaacggtggtgctgcagtatcatcaccatgacccaaacggagga
cagatgcccaaatgggttaatgtggtcctactgcagtgggtagcatggttcctacgtatg
aagcgcccaggggagagtgatgacccagagcgaccaccctgcgccccccacctacggcgc
tgctcctcaagctcccagagcggtagcatccctaaccctccagaccccacactccaccaa
ctccacccccagaacctggtccctctccaggctggcccccagcacttgggtcatccccat
cttcacgcccagtccagcgccaacaacaatggaaacctgctctacattggcttccagaat
atggacgaccccccactgctcccagatcacatccagaattacagcatctcggccgggcct
cctcgagtagcaggcagtccccctccccatctgccccctccattctgcagccctccgcca
ccacccacccccaacgcggacaccgtgggctgccctagcaccatttccagtggcggagtc
ttcggaatggggggtggaggacagtactcagcagggcgtataggcgacccccagctccag
gctattctggaggaagtgcgttacatggcggaccgcttccgtgagcaggatgagacagag
agcgtggccgaccagtggaagtttgcggcagcagtcatcgaccggctctgcctggtggcc
ttcagtgtgttcaacatcatctgcaccatcgccatcctcatgtccgctcccaactttgtg
gaggccgcctccaaggacttcttctga
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