Oncorhynchus tshawytscha (Chinook salmon): 112230200
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Entry
112230200 CDS
T05605
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04060
Cytokine-cytokine receptor interaction
otw04150
mTOR signaling pathway
otw04210
Apoptosis
otw04217
Necroptosis
otw04350
TGF-beta signaling pathway
otw04620
Toll-like receptor signaling pathway
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
otw04625
C-type lectin receptor signaling pathway
otw04920
Adipocytokine signaling pathway
otw05132
Salmonella infection
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112230200
04350 TGF-beta signaling pathway
112230200
04150 mTOR signaling pathway
112230200
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112230200
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112230200
04217 Necroptosis
112230200
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112230200
04621 NOD-like receptor signaling pathway
112230200
04622 RIG-I-like receptor signaling pathway
112230200
04625 C-type lectin receptor signaling pathway
112230200
09152 Endocrine system
04920 Adipocytokine signaling pathway
112230200
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112230200
09171 Infectious disease: bacterial
05132 Salmonella infection
112230200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112230200
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112230200
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Tumor necrosis fators
112230200
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Cytokines
112230200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
112230200
NCBI-ProteinID:
XP_024252158
LinkDB
All DBs
Position
LG23:complement(9749292..9751521)
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AA seq
246 aa
AA seq
DB search
MEGYAMTPEDMERGPVYNTTVTAVAEGKASRGWLWRLCGVLLIAVLCAAAALLFAWCQHG
RLATMQGKMEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLTADTVQWRKDDGQ
AFSQGGFELQGNQILIPHTGLFFVYSQASFRVKCNGPGEHTTPLSHIIWRYSDSIGVNAN
LLSGVRSVCQRNYGDAESKIGEGWYNAVYLGAVFQLNEGDKLWTETNRLTDVEPEQGKNF
FGVFAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtatgcgatgacacctgaagacatggagaggggccctgtgtacaacacaacg
gtgacagctgtcgctgagggaaaggcctccagaggttggctatggaggctgtgtggggtc
ctcttaatagcagttctatgtgcggcagcagccctactctttgcatggtgtcagcatgga
agactggcaacgatgcagggcaaaatggagcctcaactggagatactcattggtgcaaaa
gatacccaccatacattgaagcagattgccggcaatgcaaaagcagccatccatttagag
ggtgaatacaatcctaatcttaccgctgacaccgtgcagtggagaaaggatgacggccag
gctttttcccagggcgggttcgagcttcaggggaaccaaatcctcatcccacacactggg
ctcttcttcgtttacagccaggcttcgtttagggtcaagtgcaatggcccgggcgagcat
accactcctctgagtcacattatttggcgctattcggactccatcggggttaatgctaat
cttcttagcggggtaaggtcagtttgtcaacgaaactacggtgatgctgagtccaaaatt
ggcgaaggctggtacaatgcagtttaccttggtgcggtgtttcagctgaatgaaggggac
aaactgtggactgagaccaatcgactgaccgacgtggagcctgagcagggcaagaacttc
tttggtgtgtttgcactgtga
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