Oncorhynchus tshawytscha (Chinook salmon): 112230385
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Entry
112230385 CDS
T05605
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00510
N-Glycan biosynthesis
otw00513
Various types of N-glycan biosynthesis
otw00514
Other types of O-glycan biosynthesis
otw00515
Mannose type O-glycan biosynthesis
otw00533
Glycosaminoglycan biosynthesis - keratan sulfate
otw00601
Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100
Metabolic pathways
Module
otw_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
otw_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
112230385 (si:dkey-199f5.8)
00513 Various types of N-glycan biosynthesis
112230385 (si:dkey-199f5.8)
00515 Mannose type O-glycan biosynthesis
112230385 (si:dkey-199f5.8)
00514 Other types of O-glycan biosynthesis
112230385 (si:dkey-199f5.8)
00533 Glycosaminoglycan biosynthesis - keratan sulfate
112230385 (si:dkey-199f5.8)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112230385 (si:dkey-199f5.8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112230385 (si:dkey-199f5.8)
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
112230385 (si:dkey-199f5.8)
2.4.1.90 N-acetyllactosamine synthase
112230385 (si:dkey-199f5.8)
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
112230385 (si:dkey-199f5.8)
Glycolipid
112230385 (si:dkey-199f5.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
112230385
NCBI-ProteinID:
XP_024252434
UniProt:
A0A8C8G4F8
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All DBs
Position
LG23:complement(9444650..9471263)
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AA seq
392 aa
AA seq
DB search
MATWLQSKWRYLFMFLGVQLVVMALLSREGYHKRVSYFIRIFRKLETTATGTFGAGSLHA
SNHTGGDVYANLSLLAKAHHGRGEDMPYCPKTSPLIGGPIHVIFPSGLTLAQVARKNPLV
VRGGRYRPPDCEARHRTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYVIHQAGNYT
FNRAKLMNVGFREAMREEDWDCLFFHDVDLIPEDDRNTYMCDANPKHTAIAMDKFGYKLP
YKMYFGGVSALSPLHYLKMNGFPNNYWGWGGEDDDIGVRVSLGGMFISRPSVKVGRYKMI
KHKLDKGNDVNPRRFNMLAKTRQTWKLDGMNTLEYEVLSRDYFPLYTNITVHIGTEAGLH
ATAPSPKILAKAPAKPPVEAPAKPLTKLQQNH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtggctacagtcaaaatggcgctacctgttcatgtttctgggtgtccagctg
gttgtcatggcgctgctgtcccgcgagggctaccacaagcgagtgtcatacttcatcagg
attttccgcaagctggagaccactgcgacggggacgttcggtgccggctctctccacgca
agcaatcacacgggcggtgacgtctacgccaacttgtccctcctggccaaggcccaccac
ggccggggcgaggacatgccctactgccccaagacgtctcccctgataggtggaccaatc
cacgtcatcttcccctccgggttgacactggcccaagtggcgcggaagaatcctttggtg
gtccgtggggggcgctacaggccgcctgactgtgaggcgcggcaccgcaccgccataata
attccccacagaaaccgggagcaccacctgaagttcctcctctactaccttcacccattc
ctacagcgacagcagctcaattacggcatctacgtcatccaccaggctggtaactacaca
tttaaccgggccaagctgatgaacgttgggttccgagaggccatgcgggaggaggactgg
gactgcctcttcttccatgatgtggacctcatccctgaggacgaccgcaacacctacatg
tgcgacgccaaccccaagcacaccgccatcgccatggataagtttggatacaagctgcca
tacaagatgtatttcggaggggtgtcagcgttgtctccactgcactacctgaagatgaac
ggcttccccaacaactactggggctggggaggagaggacgatgacattggagtcagagta
tccctaggagggatgttcatctctcgtccatcggtgaaggttggccgatacaagatgatc
aaacacaagctggacaagggaaacgacgtgaaccccaggaggttcaacatgctggccaag
acacgtcagacgtggaagctggacggcatgaacacgctggagtatgaggtgctgtcacgt
gactacttccccctctacaccaacatcactgtgcacatcggcacagaggcaggcctgcat
gccacggctccgtcccccaagatccttgccaaagccccagcaaagccgccggtcgaagct
cccgccaaacctctaaccaagctccaacagaaccactga
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