Oncorhynchus tshawytscha (Chinook salmon): 112231140
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Entry
112231140 CDS
T05605
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112231140
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112231140
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112231140
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112231140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Nup88
Motif
Other DBs
NCBI-GeneID:
112231140
NCBI-ProteinID:
XP_042167557
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All DBs
Position
LG33:complement(30712218..30759026)
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AA seq
1055 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSVEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRPSGEKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDYLSEELDPKDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRHHWAVKLVTCFTIGLLFPIFSLVYLLAPRSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKLVAYFKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWMYNRLCGGDQPSPDELRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRHVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSS
SEATQQDEANNEGEGGAGQGQSRHQGAKGVSFSMSTAERKSKDSGFSVSALFKSMSGVEG
PVDNKPKCNGLRFSSSSPSFAVFSRTGGQLQRFSKSKRDSIRRLGLLFSRMNGHVPEHRA
PPPCMHQPTYSISDGLLHQPTTWPDVHIAPDPQVTCSQFHLDRLGVNLKELPQAQAPTQA
PPQGSPQQANGSDSLLLRPPSLSLPPPGHSLPPPGLSLPSLHCASGIRDSSIRASSSQAV
LLGSSEDMYESWIGPCDELDSSEWWAEQDSITTQL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcaccgtaccgcgac
cgcatcccgctgcagatcgtgcgggcggaagcggagctgtcagtggaggagcgggcgtac
ctgacagcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtaaactgcctggacccgctggggcgcagcgctctgctcatc
gccatcgagaacgaaaacctggaggtgatggagcttctgctcaaccatggcgtgcacgtg
ggcgacgcgctgctctacgccatccgcaaggaggtggtgggcgccgtggaactgctgctg
tcccaccgcaggcccagtggagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactacgag
atcatcaaactgctggtccagcgcaaagtcaccatcccccggccacaccagatccgctgt
gactgcgtggcgtgcgtgtccagctccgaggtggacagcctgcgccactcccgctcccgc
ctcaatgtctacaagaccctagccagcccgtccctcattgccctgtccagcgaagacccc
atcctgaccgccttccgcctgggctgggagctgaaagaactgagcaaggtggagaatgag
ttccgtcaggagtacgaggagctgtcccaacagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctccagagagctggagaccatcctcaaccaccgtgactacctcagt
gaggagctggacccaaaggactgccgcgacctggccaagctcaaactggccatcaagtac
caccagaaagagtttgtgtcccagccaaactgccagcagctcctggccaccctgtggtac
gacggttttcctgggtggcgcagacaccactgggcggtcaagctggtcacctgctttacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccctaggagtgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
ttccttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgccacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggatggcggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccactatctcactgaaactagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccaacgctg
atagccgaggccctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactcccacctgggacctctgcagatctccctgggacgcatgttgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgtgagaagcagaacaacgccttttctacgctgtttgagacgctgcagtccctgttc
tggtccatattcggcctgctcaacctgtacgtgaccaatgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaataattcctatcagctcatcgctgaccatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagttatttcgacgagggaggaact
ctcccgccgcccttcaacattgtccccagccccaagtcagtgtggtacctgtgtgtgtgg
atgtacaaccgcctgtgtggaggggaccagcccagccctgacgaactgaggaaacacgag
aacctaaaggagttcacggagcgtcatgctgacaacctgattcagaaccagcactatcag
gaggtgatcaggaacctggtaaagaggcatgtagcagccatgatccgcagtgctaagaca
gacgagggactgactgaggagaattttaaggagctgaagcaggacatctccagtttccgc
tatgaggtgttggatctgctggggaacaggaagcccccgcggagaacctattcatccagc
agtgaggccactcagcaggacgaggccaacaatgagggggagggaggggccggacagggt
cagtctaggcaccaaggggccaagggggtgtccttcagcatgtcaaccgctgagaggaag
agcaaggactctgggttcagtgtctctgccctctttaagtccatgtcaggggtggagggg
ccagtggacaacaaaccaaagtgcaacgggctgcggttctcctcctcctccccttcattt
gctgtgttcagccgcactggcggccagctgcagcgcttctccaagtccaagagagactcc
atcaggcggctgggtctgctcttctcccgcatgaacggacacgtcccagagcacagggcc
cctcctccctgcatgcaccagcccacctacagcatctcagatggcctacttcatcagccc
acaacctggccggacgtccatatcgcccccgatccccaggttacatgcagccagtttcac
ctggaccggctgggggtgaacctgaaagagctaccccaggcccaagcccctacccaggcc
ccaccccagggttcaccccagcaggctaacgggagtgacagcctgctcctacggcccccg
agcctctctctgccgcccccgggtcactccctaccgcccccgggcctctccctgccatcc
ctgcactgtgcttctggcatcagggactccagcatcagggcctccagctcccaggctgtc
ctcctgggctctagtgaggacatgtatgagtcctggataggaccatgtgatgagctggac
tcttcagagtggtgggctgagcaggactccatcaccacacagctttag
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