Oncorhynchus tshawytscha (Chinook salmon): 112232178
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Entry
112232178 CDS
T05605
Name
(RefSeq) integrator complex subunit 3 isoform X1
KO
K13140
integrator complex subunit 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112232178
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112232178
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
112232178
NCBI-ProteinID:
XP_042151479
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All DBs
Position
LG13:33151220..33172923
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AA seq
1033 aa
AA seq
DB search
MEPSPAKGKPQGRLLVSTTLDAKDELEERLERCVAIVTSLTNGLSEREANDAITANVCKG
PQQHEEVCLGLFALLLTEPSQAQRCYRDLTLVNRDGMNVILIKINQILMEKFLKLQDVCR
TQLVWLVRELVKSGVIGADGILMTLMKQIAGGDITNKNLWLAENVLDIVVEQREWVLKSG
MLIAMSVYTYLRLIVDHGTPALLVLRQKEVDFCIGLLREKFMECFIIGRDLVRLLQIVAR
IPEMELLWKDLLHNPQALSPQFTGKGLLQLLTARTSRKFLACRLTPDMETKLLFMTSRVR
FGQQKRYQDWFQRQYLSTAESQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTT
CTSNVAASNAKLALFYDWLFFSPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRII
PHFFPPLEGQVRQGVFNSLTFIMEKRVLAHLAPLFDNPKLDRELRSMLRERFPEFCSSPS
PPTEGRDEGTNEMKMEESVSLEMDNHVLLDKEGGCYDNTEAAFSDDEEEINNKGEGNKKR
EFRFHPIKEAIIEEPADITPYVDQLDDMMKEKVLQLQKGSDTETHCEVMQEIVDLILEED
FDSEQMSTLASCLAELFKGHFRGDVLPDEITEESLEESVCKPVCLVFRNLCQMQEDNSGF
SVLLEMLAELYQKQPKIGYHLLYYLKASKAAMGKMSLYESFAQATALGDLHTCLMMDMKA
CQEDDIRLLCYLTPSIYTEFPDETLRSAELLNMIVAVIDSTQLQELMCHVMIGNLVMFRK
DSVLNILIQSLDWETFEQYSTWQLFLAHSIPLETIIPILQHLKYKEHPEALSCLLLQLRR
EKPSGEMVKMVLSRPCHPEDQFTTSILRHWAAKHDDVLGEHIKALLIKNNNLPRKRQSLR
SSSSKLAQLTLEQILEHMDNLRLNLSNTKNSFFTQTPILQALQHVQASCDEAHKMRFSDL
FSLAEEYEEPSSKPPKSRRKAPASSPRSRKGAATPVSNEEESASSSASEEEDSKPKAPKR
KRKGSSAVASDSD
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcaccggcaaaggggaaaccacagggtcgcctattggtgtccacgaccctg
gacgcaaaagatgagctggaggagcggttggagaggtgtgtggcgatcgtcacttcgttg
acaaatggcctgtcggagcgtgaagccaacgatgctatcacagctaatgtgtgtaaaggt
ccacagcagcacgaggaggtgtgtctgggactcttcgctctgctgctcacagaaccctca
caggcacagaggtgctacagagacctgaccctggtgaatagggacggcatgaacgtgatc
ctgatcaagatcaaccagatcctcatggaaaagttcctcaagctgcaagacgtgtgccgc
acccagttggtgtggttggtgagggagctggtgaagagtggcgtaatcggagcggacggc
atcctcatgacccttatgaagcagattgcaggaggagacatcaccaataagaacctgtgg
ctggcggagaatgtgctggacatagtggtggagcaaagagagtgggtgctgaagagtggc
atgctgatagccatgtcagtgtacacctacctgcgcctcatcgtggaccacggcaccccg
gcactgctggtcctcaggcagaaggaggtggacttctgtatcggcctgcttcgagagaag
tttatggagtgttttatcattgggagagacctggtgcgtctgctgcagattgtggcccgg
atcccggagatggagctgctgtggaaagacctgctccacaacccccaggccctgagccct
cagttcactggtaagggcttgctgcagctcctgaccgctcgcacatcccggaagttcctg
gcttgtcgcctcacaccagacatggagaccaaactgctcttcatgacctccagggtgcgt
tttggccagcagaagcgataccaggactggttccagagacagtacctgtccacggcagag
agccagtcgctgcgctgcgacctgattcgctacatctgcggcgtggtgcacccatccaat
gaggtgttgagctccgacatcctgccccgctgggctatcattggctggctgctcaccacc
tgcacgtctaacgtggcggcctccaacgccaagctggccctgttctacgactggctcttc
ttcagcccagagaaggacagcatcatgaacatagagccggccatcttggtgatgcaccac
tccatgaagcctcatccagccatcactgccactctcctggacttcatgtgtcgaatcatc
cctcactttttcccccctctggaaggccaggtgcgtcagggagtcttcaactctctcacc
ttcatcatggagaaaagagtgctggctcacctagccccactctttgacaaccccaaactg
gaccgggagctgcgctccatgctgagggaacgctttccagagttctgcagttccccctca
ccccccacagagggaagggatgaaggtacaaatgaaatgaaaatggaggagtctgtttcc
ttggagatggacaatcatgtgttgctggacaaggagggtggttgctatgacaacacggag
gctgccttcagcgacgatgaggaggagattaacaacaagggtgagggaaataaaaagcgg
gagttccgattccacccaatcaaagaggccattattgaggagcccgctgacatcactccc
tacgtggaccaattggacgacatgatgaaggagaaggtgttgcagttacagaaaggaagt
gacactgagacacattgtgaagtcatgcaggagatcgtggatctgatcttggaggaggac
tttgactcagagcagatgtcaactctggcctcctgtctggccgagctcttcaagggccac
ttcagaggagacgtgcttcccgacgagatcacagaagagtcgctggaggagtctgtgtgt
aagcctgtgtgcctggtgttcaggaacctgtgtcagatgcaggaggacaacagtggcttc
tcagtgctgctggagatgctggcggagctctaccagaaacagcccaagatcggctaccac
ctgctttactacctcaaggccagtaaagcggcgatggggaagatgagtctgtatgagtct
tttgcccaggccacagcgctaggagacctgcacacctgtctgatgatggatatgaaggcc
tgccaggaggacgacatcaggctcctctgctatctcacaccatccatctacactgagttc
ccagatgagacattgcgcagcgcagagctactcaacatgattgtagctgtcatcgattca
acacagctgcaggagctgatgtgtcatgtaatgattggcaatctggtgatgttccgcaag
gactctgtcctcaatatcctcatccagtctctggattgggagacgtttgagcagtacagc
acctggcagctcttcctggcccacagcatcccactggagaccattatccccatcctgcag
cacctaaagtacaaagaacacccagaagcactctcctgtttgctgttgcaactacgcagg
gaaaagcccagtggggagatggtgaagatggtgctcagtcggccctgccacccggaggac
cagttcaccaccagtatcctgcgccactgggcggccaagcacgacgacgtcctgggggaa
cacatcaaggccctgctcatcaagaacaacaacctgccacgcaaacgccagagtctgcgt
agctccagcagtaaactggcccagctgaccctggaacagatcctggagcacatggacaac
ctgaggctgaacctcagcaacaccaagaacagcttcttcacacagacacccatcctgcag
gcactgcagcacgtccaggccagctgtgacgaggcccacaagatgagattcagcgacctg
ttttcattggcagaggagtatgaagagccctcctccaagcctcccaagtcacggcgcaag
gcccccgcttcctctccgcggtcgcgtaagggagcggccacccctgttagcaacgaggaa
gaaagcgcatccagcagtgcctcggaggaagaggactctaaacccaaagctcccaagagg
aagaggaaaggctcatctgcggtggcctcggacagcgactga
DBGET
integrated database retrieval system
