Oncorhynchus tshawytscha (Chinook salmon): 112232222
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Entry
112232222 CDS
T05605
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18-like
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112232222
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
112232222
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
PLAC
TSP1_spondin
Reprolysin_2
ADAMTS_CR_3
Reprolysin_3
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
112232222
NCBI-ProteinID:
XP_024254805
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All DBs
Position
LG12:complement(58537924..58588025)
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AA seq
1240 aa
AA seq
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MDCLFLLLWTLPIPLVSCTSVKILSTLWFWNTLKTLHIYCSHSIYSVSSTFASDTSGLNH
DYVFVTPIEVDAQGGYVTHDMLLRGRNKRSLPSMRGPVHYRLSAFGWHMHLDLQPSMVVA
EGFTVQVVGTEGITTLAQEPAHQDCLYQGFIHNFTASSAAISTCSGLSGLIRMSDEEYFI
APLPQHLAAEHNYSSPSGHHPHVVYKRSAEHKVHGGQGSIHSSQPDNPYLQHHHQHHHDD
QHGKLQRQHFCGRRKQYTPKPPAEDRLVMPDEFELPGRAKRSPITSNKVGGLNVETLVVA
DRKMLEKHGRENVTTYVLTVMNMVSSLFKDGTIGTDINIVVVSLLLLEQDPLGLSINHHA
DQSLNSFCQWQSGLIGKRHDHAVLLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINE
DTGLGLAFTIAHESGHNFGMIHDGEGNPCRKAEGNIMSPTLAGNNGVFSWSACSRQYLSR
FLGTAQASCLVDEPRQIGQYKYPEKLPGQLYDADTQCKWQFGSKAKLCNLDFVKDICKSL
WCHRTGHRCETKFMPAAEGTSCGTDLWCRRGQCVKYGDHGPRAVNGQWSGWLEWSDCSRT
CGGGVMYRERSCTSPRPQHNGKFCQGSARLNQLCNTKPCQPSGVDFRAQQCAEYNSKPFR
GWYYKWKPYTKVEAEDICKLYCIAEDFAFFFAMASKVKDGTSCSDHRGDVCIEGACEPVG
CDQILGSKATLDACGVCRGDNSTCKFFKGQYVLQHRANEYYAMVTIPPGARSIHVQEMEI
STSYLAVRTLKRKYYLTGDWTVDWPGKFQFGGTVFDYQRSFNRPESLYAAGPTNETLVFE
ILLQGKNPGVVWEYTLPRSERKPNYTWGVVRSDCSAPCAGGQISTKAICFQDQRTQVNST
QCNPQTRPVLSSHLCNTQPCPAYWTTGNWGPCSQSCGGGQQARHIQCLRKVTYQREEVVA
HSLCPVIAPAQVLPCHNQACPPEWSSGVWSQCSKSCGRGMKKRGVFCRSTDPGAKAVVVP
DSMCKPHLKPKAQETCVLRRCPKNDRLQWFTTPWGECSTSCGPGVRRRELRCGERDSQGD
YTDFPMRRCRNLPKPSGDLQQTCSRGPCPEPRLVSPGRTASAVVLGWYSSPWQQCSVSCG
GGVQSRSIQCLRQGRPAAGCLNHQRPITSRACNTHFCPAPPAHVPAPAPTFKGEQSCVDF
FSWCHLVPQHSVCNHKFYGQQCCKSCNGKKAIRLEDTLFP
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggattgcctttttcttttgctatggactttgcctatcccacttgtcagctgcacatca
gtgaagattttatccactctgtggttctggaacacattgaagacgctgcatatctactgc
tcacattccatttactctgtttcgtccacttttgccagtgacaccagtggactgaatcac
gattacgtgtttgtgacgccaattgaggtggatgctcagggtgggtatgtgacccacgat
atgctgctgcgaggccggaataagaggtccctgccatccatgaggggccctgtacactac
agactatctgccttcgggtggcacatgcacctggacttacagccttccatggtagtggca
gagggcttcacagtacaggtagtggggacagagggcatcaccacattggcacaggagcca
gcccatcaggactgcttgtatcagggatttatacacaacttcacagcttcctctgcagcc
atatctacatgttctggcttgtcaggtctgatccggatgtctgatgaggagtacttcatc
gcccccttgccacagcacctagctgcagagcacaactacagctccccaagtggacaccac
ccacacgtggtctacaaacgctcggctgaacacaaagtccatggtggccagggatctatc
cacagctcgcaacctgacaacccatatctgcagcaccatcatcagcatcaccacgacgac
cagcatgggaagctgcagagacaacacttctgtggacgccgcaagcaatacactcccaag
ccccctgctgaggatcgtctcgtcatgcctgatgagtttgagctcccaggcagggcgaag
cgatcacccatcacatctaacaaggtggggggcctgaatgtggaaacgctggtggtggca
gacaggaagatgctggagaaacacggcagagagaacgtcaccacctacgtcctcactgtt
atgaacatggtttctagccttttcaaagacggcaccatcggaactgatatcaacattgtg
gtggtcagcctgcttcttctagagcaagatccactcggcctgtccatcaaccaccacgct
gaccagtctctcaacagtttctgccagtggcagtcgggcctgatcgggaagcgccacgac
catgctgtgctcctcaccggcctggacatctgctcttggaagaatgagccatgtgacacc
ctgggttttgctcctataagtggaatgtgtagtaaataccggagctgtacgattaatgaa
gacacaggactgggcttagctttcaccatcgctcatgaatcaggccacaattttgggatg
atccatgatggagaggggaatccttgtcggaaagcagaaggaaacatcatgtctccaacc
ctggcaggaaacaacggggtcttctcctggtctgcctgcagtcgccaatacctcagccgc
ttccttggaacagctcaagcgtcgtgtctggtggatgagcccaggcagattgggcagtat
aaatacccagagaagctcccaggccagctttatgatgctgacacacagtgcaagtggcag
tttggctccaaggctaaactgtgcaacctggactttgtcaaggacatctgtaagtcactg
tggtgccacaggacaggtcaccggtgtgagaccaagttcatgcctgccgccgagggcacc
agctgtgggactgacctgtggtgtcggcgaggccagtgtgtgaagtatggtgaccacggt
ccgagagctgtcaacggtcagtggtcaggatggttggagtggtcggactgttccaggacc
tgtgggggaggggttatgtacagggagcgatcctgcaccagccccaggccacaacacaac
gggaagttttgccagggctccgctcgtctcaaccagctctgtaacacaaagccgtgccag
ccaagcggagtggacttccgtgcccagcagtgtgctgagtacaacagcaaacccttcagg
ggctggtactacaaatggaagccctacaccaaggtggaagctgaggatatctgcaagctg
tactgcatcgctgaggactttgccttcttctttgccatggccagcaaagtcaaggacggg
acatcctgctcagaccacagaggtgacgtgtgcatcgaaggagcctgtgagccggtgggt
tgtgaccagatcctgggctctaaggcaactctggatgcctgtggagtttgtagaggggac
aactccacctgcaagttcttcaaaggccagtacgtcctccagcacagagctaacgaatac
tacgccatggtgaccatcccacctggagcacggagcatccatgttcaggagatggagatc
tccaccagctacctggctgtacgcaccctgaagaggaagtactatctgacaggggactgg
actgtggactggcctggaaagttccagttcggtgggacggtgtttgactatcagcgctct
ttcaaccgcccagagagcctgtacgcggccggacccactaatgagaccctggtctttgaa
atcctgctgcagggtaagaacccgggtgtggtgtgggagtacaccttgcctcgcagtgag
aggaaacccaactacacatggggagtggttcgctccgactgctctgctccgtgtgctgga
ggtcagatctcaacaaaggccatctgttttcaagatcagcggacccaagtcaactcgaca
cagtgcaaccctcagaccagaccagtgctcagctctcacctgtgcaacacgcagccctgc
ccagcctactggacgacagggaactgggggccctgcagtcagtcctgtgggggcggccaa
caggcacgtcacatccagtgcttgcgtaaggtgacgtaccagcgagaggaggtggtggct
cactccctgtgccccgtcatcgccccggcccaggtgctgccttgccacaaccaggcttgc
ccacctgagtggagctctggggtctggtcacagtgttccaagtcgtgtgggcgtgggatg
aagaagcgcggcgtgttctgcaggagcactgaccccggagcaaaggccgtggtggtgccg
gacagtatgtgtaagccacacctcaaacccaaggcccaggagacctgcgttctgcgccgc
tgccccaagaatgaccggctgcagtggttcacaacaccctggggcgagtgctccacatcc
tgtggcccaggtgtcagaaggagagagctacgttgtggggagagggattcacagggggac
tacacagacttccctatgagaaggtgcaggaaccttcccaaaccctctggggatctccag
cagacctgcagcagggggccgtgcccagagcctcgacttgtctccccaggaaggacagcc
agtgcagtggtcctgggctggtactcttctccttggcagcagtgttctgtatcctgtggg
ggaggggtacagtcccgttctatccagtgtctgagacagggacgtcctgcagctggatgc
ctgaaccaccagagacccataacatcccgggcctgcaacacacacttctgtcctgctcct
cctgcccacgttcctgctccggcgccaacgttcaaaggcgagcagtcttgtgtcgacttc
ttcagctggtgtcacctggttcctcagcacagtgtgtgcaatcacaagttctacggacag
cagtgctgcaagtcctgcaatggcaaaaaagctataagattggaggacaccttattccca
tga
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