Oncorhynchus tshawytscha (Chinook salmon): 112233068
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Entry
112233068 CDS
T05605
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112233068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112233068
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
112233068
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
112233068
NCBI-ProteinID:
XP_024256223
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Position
LG16:complement(52103123..52149640)
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AA seq
839 aa
AA seq
DB search
MQNEAPGPAAASASSISTTPSVTTSLVTTSSTGRPTLPHISVYAGIPGRQTAQVIQQALH
RQPSTAAQYLQQMYAAQQQHLMLQTAALQQQQQLSNTQLQRLAGVQQVHATIVAGRQSSN
QIWTSSHQTCSTQTTVNPATPPAAAQIISRVQSVSSTPTCIPQQAVLLGNASSLVLTASQ
AQMYLRAQMLIFTPTAAVATVQSAASSQSATNQQSASAQVQNLAICSQQGAHSSSQLQGL
HLKQMSGGAQVSLAGQLRGPTQGPQGAQLGSLAAPSEGGQKGEGHLVTMSRSVMAVSSHP
LISPAYAQIQTHQFLQQQKQQQFVFQQQRHQTQQLSLRGQAPVLHTASIHSHSQAQMLQA
LAIQPRPKEGPVPVLPKPFVSANVPSQQATIFHSTVSPQILTHNRPSPVVTQTQTAPLPN
TKLVQMAAVNLQIQPTALTPASQLVQDSAGKELPTSEVVTENSSTPLIQQPTAPPILEVI
TIEQCPSDPSNPTTPTGGKGDAEWLNAQPGAGSLPVMTSGNGNNAPMVTGSTPQNGESKL
PQAIVKPQILTHFIEGFVIQEGAEPFPVERPLSLLIENLKKHKQQTHSDSEKTTTSSNST
TDSEMEDLSQQELKQQEEPTLTCELCGRVDFAYNFKRSKRFCSTVCAKRYNVGCTKRMGL
FPNRQTTMEKLKKQRTSNGNHQNSGSETKKQTPITGQQPGGGSVTSSHPSHPGHREFSQC
LDMSSYEGPPSPPLSAASSSAPRSQAGRGAEHMEGCGQELPLLSQHFQPRDPAKWNVEEV
YEFICSLPGCLAIAEEFRSQEIDGQSLLLLKEDHLMGTMNIKLGPALKLFAEISMLRDS
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgaggccccgggcccggcagccgctagtgccagcagcatcagtacgactccc
agtgtcaccactagcctggtcactactagcagcactgggaggccaaccctgccccacatc
tctgtctacgctgggatcccaggtagacagactgctcaggtgatccaacaggcgctccac
agacaacccagcacggcagcccagtacctgcagcagatgtatgcagcccagcagcagcac
ctcatgcttcagacagcagccctccaacagcagcagcaactgagcaacactcagctccag
aggctagccggtgtgcaacaggtccatgctaccatagtggcaggaagacagagctccaac
cagatttggacctcctctcaccagacatgttccacacagaccactgtaaacccggccacg
cctccagcagcggcccagataatcagcagagtccagagtgttagctccactcccacctgt
atcccccagcaagctgtgctcctaggcaacgcctccagcctcgtcctcaccgctagccaa
gctcagatgtatctgcgggctcagatgctcatcttcaccccaactgcagctgttgccact
gtccaatcagcagcctcatcacagtctgccaccaaccaacaatctgctagtgcacaggtg
cagaaccttgccatctgtagtcagcagggggcccactcctcctctcagctccagggcctt
catctcaaacagatgtctggaggggcccaagtctccctggctggtcagctcaggggtcca
acccaggggccgcagggagcacaactggggtccctggcggccccatcagagggggggcag
aaaggtgagggccacttggtgaccatgagccgcagtgtgatggccgtcagcagtcacccc
ctcatcagcccagcgtacgcacaaatccagacgcaccagtttctgcagcagcaaaaacag
cagcagtttgtgttccagcagcagcgacaccagacccagcagctttctctgaggggccag
gccccagtgctacacacagcctccatccacagtcactctcaggcccagatgctacaggcc
ctggctatccagccccggcccaaggagggccccgtccctgtactgcccaaaccatttgtc
tctgcgaatgttcctagccagcaggccaccatctttcactccaccgtcagtccccagatt
cttacccacaacaggccatcccctgtggtcacccagacccagactgctccgctgcccaac
accaagttagtgcagatggctgcagtcaacctccagatccagccaactgctcttacacca
gcctctcagctggttcaggatagtgctggcaaggagctgcccacatctgaggtagtcacg
gagaacagctccactcccctcatacagcagccaacagcccctcctattcttgaggtcatc
actattgagcaatgcccatcggatcccagcaaccccaccacacccactggaggtaaggga
gacgctgagtggctgaatgcgcaaccaggtgcaggctcacttccagtcatgacctcaggg
aatgggaacaatgcgcccatggtgacaggcagtaccccacagaatggcgagagcaaactg
cctcaagccatagtgaaaccccagatcctcactcactttattgagggatttgtgatccag
gagggagcagagcctttccctgtggaacgcccgttgtcgctgctgatcgagaacctgaag
aaacacaaacagcagacgcactctgactcagagaagacgacgacctcctccaacagcacc
actgactctgagatggaggacctatcacagcaagagctgaagcagcaagaggagcccacc
ctgacgtgtgagctgtgtggcagagtggactttgcctacaacttcaagagatccaagagg
ttctgctccacagtgtgtgccaaacggtacaatgtgggttgtacaaagcgaatgggcctc
tttccaaatcgacaaaccacgatggagaaactgaagaagcagagaacatccaatgggaac
caccagaactccggctccgagaccaaaaaacagactcccattactgggcaacaacctggg
ggtggatcggtgacgtccagccacccctctcaccctggtcacagggagttcagccagtgt
ttagacatgtccagctacgagggtcccccttcacccccactgtctgctgccagctctagt
gctcccaggtcccaggcgggcagaggggcagaacacatggagggctgtggacaagagctg
cccctcctctcccagcacttccagcccagagacccggccaagtggaacgtggaggaggtc
tacgagttcatctgctccctgccaggttgcctggcgatagccgaggagttccgctcgcag
gagatcgacggccagtccttgctgctgctgaaagaggaccacctcatgggcaccatgaac
atcaaactggggcctgcgctcaagctctttgccgagatcagtatgctgagagactcgtaa
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