Oncorhynchus tshawytscha (Chinook salmon): 112233299
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Entry
112233299 CDS
T05605
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04145
Phagosome
otw04218
Cellular senescence
otw04514
Cell adhesion molecules
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112233299
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112233299
04145 Phagosome
112233299
09143 Cell growth and death
04218 Cellular senescence
112233299
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112233299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112233299
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112233299
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112233299
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Antigens
112233299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
ig
C2-set_3
Ig_2
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
112233299
NCBI-ProteinID:
XP_042166000
LinkDB
All DBs
Position
LG31:8274174..8277583
Genome browser
AA seq
377 aa
AA seq
DB search
MISFCLLFLWIPITSADPHSLKYLYTAVSGDTDFPEFMVVGLLDDQQFVHFGSNTKTLVN
DAEWMNKTEKYYRELYTEPLINQYEGFKNLITFAKKQFNQTQSKGVHTIQNLYGCEWNDE
TELQDYFHHYGYDGEDFISLDMKTVRWITSVQQADTIKQKWDDNSKDLHYLKWYFTKECI
DTLKKYVNFASSVLKKIVPPSVSLLQKTPSSPVTCHATGFYPSGVMVSWQKDGQEQHEDV
LHGEILPNGDGTFQKSAHLTIDSEKWENNNYTCVVEHKENIIAIRLNQSVIKTNSVKPLE
TVPIIIGVGVVAVILLVSFIIARFIMWNRKSTASDDGSNPSMTQQNQMQLEVSLSLIKQV
MYCIYKGPVASSGLYSY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatttccttctgtctcttgtttctctggattcctataacgtctgcagatccccactct
ttgaaatacttatacactgcagtctcaggtgatactgacttcccagagttcatggtggtg
ggtttgctggacgaccaacagtttgtgcactttggcagcaacaccaagacactggtcaac
gacgctgagtggatgaataagacagaaaaatactacagggaactctacactgagcccctg
attaaccaatatgaaggcttcaaaaacctcattacgtttgcaaagaagcagtttaaccaa
acccagtcaaaaggtgttcacacaatccagaacttgtacggctgtgagtggaatgatgag
actgaactccaagattatttccatcactatggatacgatggtgaggatttcatttcatta
gacatgaagaccgtaagatggataacctccgtacagcaggcagacaccatcaaacagaag
tgggacgacaacagcaaggatctgcactatctcaaatggtacttcactaaggagtgtatt
gacactttgaagaagtatgtgaacttcgccagcagcgtcttgaagaagatagtccctccc
tcagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctacgggtttc
taccccagtggagtcatggtctcctggcagaaagatgggcaagaacagcatgaagatgtg
ttgcatggagagattctccccaacggtgatggaaccttccagaaaagtgcccacctcaca
atcgactctgagaagtgggagaacaacaactacacctgtgtggttgagcacaaagagaac
atcatcgccatcagactgaatcagtctgtgataaaaacaaacagtgtcaagcctcttgaa
actgtccccatcattattggagtaggagtagtagctgtcatcctcctagtctccttcatc
atagctaggtttattatgtggaacaggaagagtacagcctctgatgatggttccaacccc
tccatgacacagcagaaccagatgcaacttgaggtttctctctcactaatcaaacaggta
atgtactgtatctataaaggtccagtggcatcaagtggtttgtactcctattag
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