Oncorhynchus tshawytscha (Chinook salmon): 112235796
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Entry
112235796 CDS
T05605
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112235796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112235796
04121 Ubiquitin system [BR:
otw04121
]
112235796
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112235796
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
112235796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
F-box-like
ANAPC4_WD40
Nup160
NBCH_WD40
F-box
Ge1_WD40
CDtoxinA
eIF2A
WD40_like
PQQ_2
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
112235796
NCBI-ProteinID:
XP_042168081
LinkDB
All DBs
Position
LG34:13294873..13407766
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AA seq
621 aa
AA seq
DB search
MLRHCPIPLFTSSRSRKKMPKASGKEKAPLATPESLALDIVADPKVVVKVAKEPPLPPQK
VLRLFSINIITQGLPFCRRRMKRKLDHGPEVRSFPSGKKPCKGSEYPSATGLVPYPATPT
TFGHIRTANGQGQQRRRITSIPSPTGLQEWLRTFQSWSGPEKLMALDELIDSCEPTHVKH
MMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCRE
EASIDEPLAFKKRKITKPGFTHSPWKCAYIRQHRIDTNWRRGDLRSPKVLKGHDDHVITC
LQFCGNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVW
NAETGDCIHTLYGHTSTVRCMHLHEKTVVSGSRDATLRVWNVETGQCLHVLMGHVAAVRC
VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW
DVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSA
VTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV
GSRNGTEETKLLVLDFDVDMK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcattgccccataccccttttcacatcttccagatcccgaaagaagatgccc
aaggcctctgggaaagagaaggcccccctggcaacaccggagagcctggccctggacata
gtggcagacccaaaagtggtggtcaaggtggctaaggagcctccactgcccccgcagaaa
gtgctccggctcttcagcatcaacatcatcactcaggggctgcccttctgtcgcagacgg
atgaagagaaagttggaccatggcccagaggtccgatctttcccttcaggaaaaaagccc
tgcaaaggctccgagtatccaagtgctacagggctggtcccctacccagccacccccacc
acgtttgggcacatcaggacagctaacggtcaggggcagcagagacggcgtatcacctcc
atcccttctcccacaggtctccaggaatggctccggacatttcagagctggagtggccca
gagaagctgatggcgctggatgagttgatcgacagctgtgagcccacgcatgtcaaacac
atgatgcaggtcattgagccgcagttccaacgtgacttcatctccctgctgcccaaagag
ttggccctgtacgtgctgtcgttccttgagcccaaggacctgctgcaggccgctcagacc
tgtcgttactggaggatcctggctgaggacaacctcctctggagggagaagtgccgggag
gaggcaagcattgatgagcctctagccttcaagaagaggaaaatcaccaagccgggcttc
acccacagcccctggaagtgtgcgtacatcaggcagcataggatagacaccaactggagg
agaggagacctccgatcacccaaggtgcttaagggtcatgatgaccatgtcatcacctgc
ctccagttctgtggtaaccgcatagtcagcggctctgacgacaactcgctcaaggtctgg
tcggctgtcacaggaaagtgtctgaggacgttggtgggccacacggggggcgtgtggtcg
tcccagatgagggacaacatcatcatcagcggctccactgaccggacgctaaaggtctgg
aacgcggagacgggcgactgtatccacaccctgtacgggcatacctcaacggtgcgctgt
atgcacctgcacgagaaaacggtggtgagtggttctcgcgacgccacgctgcgcgtgtgg
aacgtggagacgggccagtgtttacacgtcctcatgggccacgtggcggcggtgcgctgc
gtccagtacgacggccgcagggtggtcagcggggcctacgacttcatggtcaaggtctgg
gaccccgagactgagacctgcctccacacgctgcagggccacaccaacagagtctactca
ctacagtttgatgggatccacgtggtgagtggtagcctggacacgtctatccgggtgtgg
gatgtggagacgggtaactgcatccacactctgacgggtcaccagtccctcaccagcggc
atggagctcaaagacaacatcctggtctcgggcaacgccgactccaccgtcaagatctgg
gacatcaagacgggacagtgcctgcagacgttgcaaggtccccacaagcaccagagcgcc
gtgacgtgcctgcagttcaacaagaactttgtcatcaccagctcggacgacggcacggtg
aagctgtgggacctgaagacgggcgagttcatccgtaacctggtgacgctggagagcggc
ggcagcggcggggtggtgtggcgtatccgcgcctccaacaccaagctggtgtgtgccgtg
ggaagccgcaacggcaccgaggagacaaaactactggtgctagactttgacgtggacatg
aagtga
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