Oncorhynchus tshawytscha (Chinook salmon): 112235852
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Entry
112235852 CDS
T05605
Symbol
sp1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112235852 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112235852 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112235852 (sp1)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112235852 (sp1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
112235852 (sp1)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112235852 (sp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
112235852
NCBI-ProteinID:
XP_024260162
LinkDB
All DBs
Position
LG02:complement(9386091..9397609)
Genome browser
AA seq
674 aa
AA seq
DB search
MSDQQDEMAAMVESGGGFLQKRNTNTGQDSQQPSPLALLAATCSRIDTPGESDSGSEQQL
DLSQAQLTQTANGSWQIIPVSLGSSSGSNTITTDSTGMVMTAGDSGKNRGQQVLTSVSSG
HQGQQQYVLSSAPSLQGQQVLTMSGGQVVSMPNIHYQVIPQFQTVDGQHLQFAQAGVQQD
PNAAGAGQFQLVSSPNGGQQLVRTGSGGNILTMPAGVLQQAIPLQNLGLGNSVLQNNQGQ
FQLANMPGLLNGNITLLPVSAASGSEGDGGSNQQLMQQVVSTSGTYYTNSTTTTTQTGTS
YGGMTQQTQSTNGFQNSGGGIPIQPDNRDQPQQILIQPQQLIQGGTSLQTISAGGQVFAT
PTLTQDALQNLQIQTLPNTSPILLRTVGLNGQVSWQTLQLQSPAGTQITLAPMQGLSQLG
QAQGGTMQLPGLHTINLNTLQNSGLQMHQLQGVPITISNTAGDQGLQAGGDSLDDGTVME
EGDTSPQPQNRRTRREACTCPFCKDGEARDPNKKKQHICHMPGCGKVYGKTSHLRAHLRW
HTGERPFVCGWSFCGKKFTRSDELQRHKRTHTGEKKFTCTECPKRFMRSDHLSKHLKTHL
NKKGTTGGAVTSDNSAPQSGGGGATDGGAGGVVNDQHALIAMETLSPEGIARLASSGINV
MQVADLHSINSNGY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaacaggatgaaatggccgcgatggtggaaagcggtggaggcttccttcaa
aagcgaaacacaaataccggacaagactcccagcagccctctcctttagctctgttggca
gcgacctgtagtagaatcgacaccccaggcgagagtgactccggctccgaacaacagtta
gacctaagccaagcccagctgacccagacagccaatgggagctggcagatcatccctgtc
agtctcggtagctccagtggttccaacaccatcaccaccgactccactggcatggtcatg
accgcgggcgactcggggaagaacagggggcaacaggtgttgacgtcggtctccagtggg
caccagggacagcagcagtatgtgctgtcctcagctccttctctacagggccagcaggtc
ctcaccatgtctgggggccaggttgtgtccatgcccaacatccattaccaggtgatccct
cagttccagacggtggatggccagcatctacagtttgcccaggcaggggtgcagcaggac
cctaatgcagctggggcagggcagttccagctagtctcctcgcctaacgggggtcagcag
ctggttagaacagggagtggaggaaatatcctaaccatgcccgccggggtcctacagcaa
gccatccccctacagaatctaggtctgggtaacagcgtcctgcagaacaaccagggccag
ttccagttggctaatatgcctggtctcctaaatggcaatatcaccctccttccggtcagt
gcagctagtgggtctgaaggggacggaggctctaaccagcagctgatgcagcaggtagtg
tcaacctctggcacatactacaccaactcaaccaccaccaccactcagacgggcacctcg
tatggaggcatgacacagcagactcagagcaccaatggcttccagaattctggcggcggg
atccccatccagccagataacagagatcagccgcagcagatcctcattcaaccccagcag
ctcatccaaggagggacctccctgcagacaatctcagctgggggacaggtgttcgcgacc
ccaacgcttacccaggatgccctgcagaacctgcaaattcagaccctccccaacacctct
cccatcctgctgaggaccgtcgggctcaacggacaggtgagctggcagaccctccagctg
cagagcccagcggggacccagatcaccctggcccccatgcagggtctctctcagctgggc
caggcccagggaggtaccatgcaactccctggcctgcacaccatcaacctcaacacactg
cagaactctggtttacagatgcaccagctacaaggagtccccatcaccatctctaacaca
gctggagaccagggtttgcaggcagggggagacagtctggatgacggcacagtcatggag
gagggagacacgtcccctcagcctcagaaccgccggacacgcagggaagcctgcacctgt
cccttctgcaaggacggagaggcgagagatcccaataagaagaaacagcatatctgtcac
atgccaggttgtgggaaggtgtacggtaagacatctcacctgagagctcaccttcgctgg
cacactggagaacgacccttcgtctgtggctggtccttctgtgggaagaaattcactcgc
tcagacgaactgcaacgccacaagaggacacacacaggtgagaagaagttcacgtgtacg
gagtgtccaaagcgcttcatgcgcagcgaccacctctccaaacacctcaagacccacctc
aacaagaaaggaaccaccggtggcgctgtgacctccgataactccgcccctcagtcgggt
ggaggcggagccacagatggcggggccgggggtgtggtcaatgaccaacacgccctcatt
gccatggagacactgtcgcccgagggcatcgcccgattggccagcagcggcatcaacgtg
atgcaggtggctgacctgcactccatcaacagtaatggatattga
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