Oncorhynchus tshawytscha (Chinook salmon): 112236159
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Entry
112236159 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112236159
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112236159
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112236159
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
otw04090
]
112236159
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112236159
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112236159
CD molecules [BR:
otw04090
]
Proteins
112236159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
GH97_C
Fn3_Dep-1_2nd
Motif
Other DBs
NCBI-GeneID:
112236159
NCBI-ProteinID:
XP_024260504
LinkDB
All DBs
Position
LG05:81186133..81228801
Genome browser
AA seq
749 aa
AA seq
DB search
MAGLYGLKILLLCTGLIELAICSTRTIPPPGTVAIINKPTSIPITPLNSQTASISTTPPP
INDQDKSIISSTSPTQSTKNANDSTGPLLQNTTTITTTATTTLSPSLSSLTPTSNIITRA
SSQATLSNVTGDSSTSTSDPASTLNQTQTSDPASTLNQTQTSDPASTLNQTQTSDPASTA
VAQTQTSDPASTAVAQTQTSDPASTLNQTPAFSTNTSTSQSQAYKNSLPTSTPPIHNQTS
PASTLTSTTAIPTGSQTKPTPPKCTYTVTPVIYGFRIDLKASTSDTYNISYQDESGQHMT
VEHQTVNNTIVVSLKPCRKYTFTTIQPECELQGNSTLRTEKMDDLEFSTNTKPGYLCYVT
KWDISDAEWNSPVITWDKDNCFELLDEHFCTNFTTNVAVPGDCSVNISKTIPITAEYSTV
KHSPNLEFKNVLPVEIVWKNKPKNCSPKDLDIHYTCEGNNGSINLDDLEPFQKYNCSGKF
THNSKVINTKSIDIEIKCKVDITQTSTNTSISLKWTNDSINCPNNTQLFHSCVSCRIETK
VKDCYTTDELHYDFNKLQPFTKYICSIEPRYKDMSYDTLKKVSKTIQTAPGVPDEVVKTS
LTYTQNNAFTITCEELKPVQWKGKEKWYIATITGSETKEQKHKKCNFTFADLGYSTDYTV
QIFTYNGKYKSKPIEKHITTRYNDKAVTVFLIILTSLALLFFLYKIYNLQRKTSNTTSET
KTTVMFISGTVPLPRGFRGVKTDAWYTLR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctctatggactgaagatcctgctgctgtgtactgggctcatagagctggcc
atatgctccacaagaacaatacccccaccaggaacagtagccatcatcaacaaacccaca
agcattcccatcacacctttaaactctcagacagcatccatctcaaccactcctccaccc
ataaatgaccaagacaaaagcattatctccagtacttcacccacacaatccaccaagaat
gcaaacgactccacaggccctttacttcaaaacaccaccaccatcaccacgacagccact
acaaccctctcaccttcactcagttcgcttacccccacctcaaacatcatcactcgggca
tcaagccaagctaccctctccaacgtaactggcgactcgagcacaagcacttctgaccct
gcaagcaccctcaaccaaacccagacatctgaccctgcaagcaccctcaaccaaacccag
acatctgaccctgcaagcaccctcaaccaaacccagacatctgaccctgcaagcactgca
gtcgcccaaacccagacatctgaccctgcaagcactgcagtcgcccaaacccagacatct
gaccctgcaagcaccctcaaccaaaccccagccttttctacaaacacctccacctctcaa
tcccaggcctacaaaaactctttgcctacaagcactccacccattcacaaccaaacctca
cctgcaagcaccctgacttccactacagctatccccacaggcagccagactaaaccaaca
ccgccaaagtgtacatacacggtcacgcctgtcatctatggctttcggattgacttaaag
gcctcaacctccgacacatacaacatatcgtaccaggatgaatcaggacaacacatgact
gttgagcatcaaacggtgaacaacactattgtggtatcattgaagccttgcaggaaatac
acttttacgacgattcagcctgaatgtgaactccaaggaaatagcactctgaggactgag
aaaatggatgacctagagttttccaccaacacgaagccgggatatttgtgttatgtgacg
aaatgggatatcagtgatgctgaatggaacagtcctgttatcacctgggacaaagacaac
tgttttgagcttttagatgaacatttctgcacaaacttcacaaccaatgtagctgtgcct
ggagattgcagtgtcaacatcagcaaaactatacccataacagcagagtattctacagtc
aaacactctcccaatctggaattcaaaaacgtactccctgttgaaatagtatggaaaaac
aagccaaaaaactgtagccctaaagatctggacattcattacacctgtgaaggaaacaac
gggtctatcaacttggatgatttggaaccctttcagaaatacaactgtagtggaaagttt
actcacaacagtaaagtcatcaataccaagtccattgacattgaaatcaagtgtaaagtg
gacattacccaaacgtctacaaacacctccataagccttaaatggaccaatgacagcatt
aactgccccaacaatactcagctatttcactcctgcgtttcctgtagaattgagactaaa
gttaaagattgttacaccacggatgaattacattatgattttaataaattgcagccgttc
acaaagtatatctgttcaattgagccaaggtacaaagacatgagctacgatacactcaaa
aaagtgtctaagacaatccaaactgcacctggagtacctgatgaggtggtgaaaacgagt
ctgacttatactcagaacaatgcttttaccattacatgtgaggaattaaagccagttcag
tggaagggaaaagagaagtggtacattgcaacgatcactgggtctgagacaaaagaacaa
aaacataaaaaatgcaattttacatttgcggacctcggctattcaacagactacacagtt
cagatctttacatacaatgggaaatacaagagtaaaccaatagaaaaacacattactact
cgctacaatgacaaagctgtgactgtgttcctcatcatcctgacgtctctggctctcctc
ttctttctctacaagatctacaacctgcagcgcaagacgtccaacacaacatctgagaca
aagacaactgtcatgttcatcagtggaacagttcccttgcctcgaggattcagaggggta
aaaactgatgcttggtacactcttagatga
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