Oncorhynchus tshawytscha (Chinook salmon): 112236284
Help
Entry
112236284 CDS
T05605
Name
(RefSeq) ceramide synthase 6-like isoform X1
KO
K23727
sphingoid base N-palmitoyltransferase [EC:
2.3.1.291
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00600
Sphingolipid metabolism
otw01100
Metabolic pathways
Module
otw_M00094
Ceramide biosynthesis
otw_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112236284
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.291 sphingoid base N-palmitoyltransferase
112236284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_LAG1_CLN8
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112236284
NCBI-ProteinID:
XP_042172638
LinkDB
All DBs
Position
LG03:43401367..43430287
Genome browser
AA seq
397 aa
AA seq
DB search
MAGILAWFWNERFWLPHNVTWADLKNTDEAAFPQAEDLYLACPLAFCIFMIRLVFERFIA
RPCALGLQIQANGPQKAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRTIQRWFRQR
RNQEKPSTLARFCESMWRFTFYLYIFTYGVRFLKKTPWLWNTRECWYDYPYQPLTVDIHY
YYILELSFYLSLLFSQFTDIRRKDFLIMFLHHLATISLITFAYVNNMARVGTLVMCLHDS
ADVLVEAAKMANYAKFQRLCNLLFVMFAMVFISSRLGVYPVWILNTTLFESWEIVGPYPS
WWVFNLLLILLQFLHSFWSYLIVKIACRAISRGKAGKWNPLHVSKDDCSDIESSSDEDNG
PPPIPVQKHHNSTTNGTNKVHGTNGYLSAGAPCLDEH
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtattttggcatggttttggaacgagagattttggctccctcacaatgtaacc
tgggctgacctaaaaaacacagatgaggcagccttcccgcaagctgaggatttgtatctg
gcttgtcctttagccttctgcatctttatgattcgactggttttcgaaaggtttattgcc
agaccgtgtgccttgggtctccagatacaagccaatggaccacagaaagcccagcccaat
gccattttggagaaggtgttcactgctatcaccaagcatccagatgagaagaggttggag
ggcctgtccaaacagctagactgggatgtacggaccatccagcgctggttccgacagcgc
aggaaccaggagaaacccagcacgttggctcgcttttgtgagagcatgtggcgatttaca
ttttacctctatatatttacctacggagtgcgtttccttaaaaagacaccatggttatgg
aacacaagagagtgctggtacgactatccttatcagccgctgacggtggacatccactat
tactatatactggagttgtcgttctacctgtccctactcttctcccagttcacagatatc
agaaggaaggacttcctgataatgttcctgcaccacctggcgacaatctccctcatcacc
ttcgcctacgtcaacaacatggctagagtgggcacgctggtcatgtgtctccatgactcc
gctgacgtcctggtggaggctgccaaaatggccaactatgccaagtttcagagactttgc
aacctcctgtttgtcatgtttgcaatggtcttcatcagctccaggctgggtgtctatcct
gtctggattttaaacactaccttgtttgagagctgggagatcgtggggccgtacccctcc
tggtgggtgttcaacctactgctgatcctgctgcagttcctgcactccttctggtcctac
ctcatagtgaagatagcctgtcgagctatctccagaggaaaggcagggaagtggaatcct
ttacatgtgtcgaaagacgactgcagtgacattgagtccagctcggacgaggacaacggt
cctccgcccattcctgttcagaagcaccacaacagcaccaccaacggaaccaataaagtc
cacgggaccaatgggtacctgtcagcaggggccccatgtctagatgaacactga
DBGET
integrated database retrieval system
