Oncorhynchus tshawytscha (Chinook salmon): 112236358
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Entry
112236358 CDS
T05605
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112236358 (exd2)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
112236358 (exd2)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112236358 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
DUF6223
Motif
Other DBs
NCBI-GeneID:
112236358
NCBI-ProteinID:
XP_042186301
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All DBs
Position
LG11:complement(53994758..54008826)
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AA seq
629 aa
AA seq
DB search
MATRFNALMATVVTLLGATLGGLLLWRQLTLRTQKKRRLAPGQIGVSTGPVSVEQLSPVK
PEPVVVEPVESQLTPGQSLDLLLPVSLPPADQLLAVQSVMVSSEEDWEQLWPSLQKELSV
YPVLGLDCEWVSVNGKSSAVSLLQMTSYSGLCVVVRLQLLRGSQQDFPLSLKEVLRDPHV
LKVGVGCYEDGKRLTRDYGLSLGSTVDLRYLALRQRKVVLNNGLSLKSLAADLLNVSLDK
SMALRCSNWEADQLTPEQIAYAARDAQVSIALFIHLLGLNSDTTPSPDSGSGYTQLANRC
QGLVDTPFRERGEGEDGERKRKKRQQPTLETGDQQVPDPRRNNRRKPLGVGYAARKSPLY
DNCFLYAPDGQPLCTCDKKKAQWYLDKGIGVMQNEEPFIVRLLFEPSGRPDSQQDYYLTA
KENLCVVCGKNNSYIRKNIVPQEYKRHFPSEMKDHNSHDILLLCTSCHAASNVHDGFLKQ
QLADEYGTPQGCEEGVYLLEDSDRRRVRSAARALLTVGAGLPEARRDELQKVIRCFFNNT
DLELTPETLQSAADLETRIFNESYIPHGLKVVKATAEQGLKGLIELERRWRQHFLSTMTP
RYLPSLWSVSHNHNKLLRTYGEDLPIQLN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctactagatttaatgccctgatggctacggtggtcaccctgttgggggccaccttg
ggaggcctgttactatggcgacagctaaccctgaggacacagaagaagcggcgtctagct
ccgggtcagataggggtcagcactggtcccgtatcagtggaacagctgagtcctgtgaaa
ccagagcctgtggttgtggagccagtcgagtcccagctaacccctggtcaaagcctggac
ctcctcctgcctgtttcactgccccctgctgaccagctcttggcagtgcagtctgtgatg
gtgagctctgaggaggattgggagcagctgtggccgtcgctgcaaaaggagctatcagtc
taccccgtcctcgggctggactgcgaatgggtgtcagtgaatggtaagtcgtcagctgtc
tccctcctccagatgacttcctactctggcctgtgtgtggtggtgaggctacagctgctc
cgaggaagccagcaggactttcccctcagcttgaaggaggtcctccgggacccccatgtc
ctgaaggtgggcgtgggctgttatgaggacgggaaacgtctgacccgagactacggtctg
tctctggggagtaccgtggacctgagatatctcgcactacgacaaaggaaagtagtgctc
aacaatggtttgagcctcaagtctctggctgctgacctgctcaatgtgtctctggataaa
tccatggctctacggtgcagtaactgggaggctgaccagctgaccccagaacagatagct
tacgcagcccgagacgcccaggtatccatcgccctgttcatccacctgctgggcctcaac
tcagacaccacgccctcacctgacagtgggagtggctatacccagctggccaatcgctgc
cagggcctggtagacacacccttcagggagaggggtgagggagaggacggtgagaggaag
aggaagaagcggcagcaacctactttggagactggggaccagcaagtaccagaccccaga
aggaacaacaggagaaaaccgctcggcgtgggctacgctgctaggaagtctcctctttat
gacaactgcttcctctatgccccggatggacaacccctctgtacctgcgacaagaagaag
gcccagtggtacctggataaaggaatcggagtgatgcagaatgaggagcccttcatcgtg
cgtctgctgtttgagccttctggacgtccagactcccagcaagactactacctgactgcc
aaggagaacctgtgtgtggtgtgtggcaagaacaactcttatatcaggaagaacatcgtt
cctcaagaatacaaacgtcacttcccctcggagatgaaggaccacaactcccatgacatc
ttgctgctgtgcacttcctgtcacgcggcctccaacgtgcacgacggcttcctgaagcag
cagctggctgatgagtatggcacgccccaggggtgtgaggagggcgtatatctcctggag
gactctgaccgcaggagggttcgttctgcagcccgagccctgctcaccgtgggggctggg
cttccagaggccaggagagatgagctacagaaggtcataaggtgcttcttcaacaacact
gacttggagctgactcctgagacacttcagagtgctgcagacctggagaccaggatcttc
aatgagagctacattccccacgggctgaaggtggtgaaggcaaccgccgagcagggcctg
aaaggattaatagagctggagcgccgctggaggcaacacttcctgtctaccatgacacct
cgctaccttccttctctctggtctgtcagccacaaccacaacaagttactacgcacgtac
ggagaggaccttcccatccagcttaactga
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