Oncorhynchus tshawytscha (Chinook salmon): 112236514
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Entry
112236514 CDS
T05605
Name
(RefSeq) sodium-dependent noradrenaline transporter-like
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112236514
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112236514
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112236514
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112236514
NCBI-ProteinID:
XP_042186982
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Position
LG12:complement(73512906..73565469)
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AA seq
632 aa
AA seq
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MNIQVLPDHKLSSVAPLKPCNVEKKEVELILVKDQNGVQYTSSTIMPTPSTHGTPSTHGT
PCTAEELEERETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYILFLVIAG
MPLFYMELALGQYNREGAATVWKICPVFKGVGYTVIIIALYVGFYYNVIIAWSLYYLFSS
MTSELPWLHCGNAWNSPNCTDPKLLNGSFLGNGTSYAKYKMTPAAEFYERGVLHLHESRG
IQDLGMPRWELVLCLVAVVFLLYFSLWKGVKSSGKVVYITATMPYVVLFVLLIRGITLPG
AMDGIRAYLHIDFKQLNDPKVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDAILT
STVNCVTSFFSGFAIFSVLGYMAYKHGVRIEDVATEGAGLVFIIYPEAISTLPGSTFWAI
VFFIMLLTLGIDSSMGGMEAVITGLSDDFKILKRNRKLFTFATAFGTFLVALFCITNGGI
YVLTLLDNYAAGTSILFGVLIEAIGVSWFYGVDRFSEDIERMMGFKPGLYWRLCWKFVSP
TFLLVVVIASIVTSTGLSYDDYVFPSWSNVIGWGVALSSMMFVPIYAIYKFLSMPGTFKQ
RIAYCITPEHEHHLVAEGATIRQFTLKHWLAI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccaggtcctgccagaccacaagctgtcatcagtggccccgctgaaaccctgc
aatgtggagaagaaggaggtggaactgatactggtgaaggaccaaaatggggtccagtat
accagttcgaccatcatgcccacccccagcacgcacggcacccccagcacgcacggcacc
ccctgcaccgccgaggagctggaggagagggaaacatggggaaagaaaatagactttctc
ctatccgtcataggcttcgcagtggacttggccaatgtctggcgattcccttacctctgc
tacaagaatggaggtggtgcctttctaatcccctacattctgttcctggtgattgctggg
atgccactgttctatatggaactagccctgggacagtacaatagggaaggagctgctaca
gtctggaagatctgccctgtctttaaaggtgtgggctacactgtgatcatcatagcgttg
tatgtgggtttctactacaacgtcatcatagcctggtccctgtactacctgttctcctct
atgaccagtgagctgccctggctccattgtggcaacgcctggaacagtccgaactgcaca
gaccccaagctactaaacggatccttcctgggcaatgggacgtcttatgccaagtacaag
atgacgcctgctgcagagttctatgagcgtggcgtactccacctccatgagagcaggggg
atccaggacctgggcatgcctcgctgggagctggtcctctgtctggtggctgtggtcttt
cttctctacttcagtctctggaagggcgtcaagtcctctggcaaggtggtgtacatcacg
gccaccatgccctatgtggtgctgttcgtcctgctgatcagaggcatcactctgccaggg
gctatggacggcatacgggcctacctccacatcgactttaaacaactcaacgaccccaag
gtgtggattgacgctgctacccagatcttctactcattgggagctggctttggagtgctc
attgcatttgctagctacaataaatttgacaacaactgttacagggatgctatcctgacc
agtacagtgaactgtgtcaccagcttcttttcaggtttcgccatcttctctgtgctcggc
tatatggcctacaaacacggagtaaggatagaggacgtggccaccgaaggtgcaggactg
gtgttcatcatctatcctgaggccatctccaccctgcctggatctaccttctgggccata
gtattcttcatcatgctgctgactctgggcatcgacagctctatgggcggtatggaggca
gtcatcacaggactgtcagacgacttcaagatcctgaagaggaacaggaagctgttcacc
ttcgccacggcattcggaaccttccttgtcgcgctcttctgcatcactaatggaggtata
tatgtgctgactttgttggataactacgcggcagggacctccatcttgtttggggtgctg
attgaggccattggggtgtcctggttctacggcgtggaccgcttcagtgaggatatcgag
cgcatgatgggcttcaagccaggtctctactggaggctgtgctggaagtttgtcagcccc
accttcctactggtcgtggtgattgccagcatcgtgacgtccacgggcctgagttatgat
gactatgtctttccttcatggtccaatgtgattggctggggcgtagctctgtcctccatg
atgtttgtgcccatctacgccatctacaagttcctcagtatgccagggacattcaaacag
aggatcgcctactgcatcacaccagaacacgaacatcatctggtggcggagggagctacc
atcagacagttcacgctcaagcactggttggctatctga
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