Oncorhynchus tshawytscha (Chinook salmon): 112236629
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Entry
112236629 CDS
T05605
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112236629 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112236629 (ap4b1)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
AP-4 complex
112236629 (ap4b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
112236629
NCBI-ProteinID:
XP_042155899
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All DBs
Position
LG16:88424994..88457918
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AA seq
717 aa
AA seq
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MPYLGDEHTVRELRRALSNPNVQADHLRYRNTIHRVIRVMSQGQDVSGLYSEMVKACATV
DIVQKKLVYVFLCSYASLNPELSLLVINTLRKDCSDHNPMVRSLALRNMCNLRLPGLSQY
VQQPLTVGLKDKAACVRRVAVLGWAKIHSLQPNTEMDVAVVNELYGLLRDPDPVVMVNCL
RALEEILQEEGGVAINKPIAHHLLNRLKLCDVWGQSEVLAVLQRYRPRGEDELFDILSLL
DPALLSHHAPVMAATLRLFLSLCSTLPAVCMSALERARGPLLAAAGSTSRELRYAALCHI
QLLLRSEPGLLGEHYKRFFCGYAEPPYIKQNKMQVLVELVNDDNVAMVLDELRGYCTDVN
TETSQTAINAIGSIGRSYTDRCLAILTGLLGLKQEHITSAVLQTLRDLVWVCPQCGDAVC
SALEGWEDNLQDSQGRGALLWLLGVYGDRVTGAPYLLEDCIDGVRSEVSAEVKTELLTAT
LRLFLSRPAETQDMMGRLLVYCIEEEVDMCVRDQALLYYRLLHCGIEEVRQVLQGGRRSD
PSLGPLIGRPPEPISQWASIFNTLEPLTLGASTVGNSDPVTPKLSTLTPNTLTSNAEAMT
PTPGDPHLPDCSSGALSLSVSPALTPEEFERLWLQLEKGACLEVCVACPVPRCSPEGLQV
ALQLVNIQTLAFTPPNTHPWRVYLYTHTSHISTKTPHTLILAELLHTGGEGEKGIIN
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccttacctgggcgatgagcatacagtgagggagctgaggagggctctgtccaaccca
aacgtccaagctgaccacctacgctacagaaacaccatccacagagtcatcagagtgatg
tctcaaggacaagatgtatctgggttgtacagtgagatggtgaaggcatgtgcaacggtg
gatattgtccagaagaaactggtgtatgtgtttctgtgttcctatgccagtctgaaccct
gagctgtctctgctggtaataaacaccctgaggaaagactgctcggatcacaaccccatg
gttcgcagcctggccctacggaacatgtgcaacctcaggctcccaggtctatcacagtat
gtgcagcagcctcttacagtgggactgaaggacaaggcagcgtgtgttcgcagagtggct
gtactgggctgggccaagatacactcattacaacctaacaccgagatggatgtagctgta
gtgaatgagttgtatgggttgctaagggacccagacccggtcgtcatggtgaactgtctc
cgggcactggaggagattctacaggaagaagggggcgtggctatcaacaaacccattgct
caccacctcctcaacagactgaagctatgtgatgtgtggggccagtctgaggtgctagcg
gtgctccagcggtatcggcctcgcggcgaagacgagttgttcgacatactatctctgtta
gaccccgcccttctctcgcaccacgcccccgtcatggccgccacgctccgcctcttcctg
tccctgtgttccacgctgcctgccgtgtgtatgtcggcacttgagagagcacggggcccc
ctcctggctgccgccggcagcacctcccgggaactacgctatgcagcgctatgtcacatc
cagctgctgctccgttctgagcctggtctgttgggggaacactacaagcgcttcttctgt
ggctatgctgaaccaccttacatcaaacagaacaagatgcaggtgctggttgagttggtg
aatgacgacaacgtggcgatggttctggacgagctgagaggatactgtactgacgtcaac
actgagacctcacagactgctatcaatgctataggtagtatagggaggagctacactgac
aggtgtctggccatcctcacgggactactgggactgaagcaagaacacatcacctctgcc
gtgctccagactctgagggacttagtgtgggtgtgtcctcagtgtggagatgcagtgtgt
tcagctctggaaggatgggaggacaatctacaggatagtcagggtcgtggggccttgctg
tggctgctgggtgtctacggggacagggtgactggcgccccctatctgctggaggactgt
atagacggggtgaggagtgaggtgtcagcggaggtcaagacagagctgctcactgcaaca
ctacggctgttcctgtccagacctgctgagactcaggacatgatgggacgactgctggtc
tactgtatagaggaggaagtggacatgtgtgtgcgtgaccaggccctgctgtactaccgg
ctgttgcattgtgggattgaggaggtccgtcaggtcctccagggtggacgacggtcagac
ccctctctggggcctctgattggacggccccctgagcccatcagccaatgggcatccatc
ttcaataccttggagcctctaaccctcggagcctctactgtggggaactctgaccccgtg
acccccaagctctccacactgacccccaacaccctgacctctaacgctgaagccatgacc
cctacaccaggagacccccaccttccagactgcagtagtggagctctgagtctgtctgtg
tctccagctctgacccctgaggagtttgaacgcctgtggttgcagctggagaagggggcg
tgtttggaggtgtgtgtggcgtgtcctgttccccgctgttccccggagggcctgcaggtg
gcgctacagctggtcaacatccagacgctggctttcacccccccaaacacacacccctgg
agggtgtacctctacacacacacctcacacatctctacaaagacaccacacacactcata
ctggcagaactactacacactggaggagagggagagaaagggatcatcaactag
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