Oncorhynchus tshawytscha (Chinook salmon): 112236937
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Entry
112236937 CDS
T05605
Name
(RefSeq) tight junction protein ZO-2-like
KO
K06098
tight junction protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112236937
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Herpes_LMP1
Motif
Other DBs
NCBI-GeneID:
112236937
NCBI-ProteinID:
XP_042187237
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All DBs
Position
LG12:complement(9670792..9932390)
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AA seq
1249 aa
AA seq
DB search
MSDESGLPAVGGLVFGSTGESTAAPHGGGPGWRVPGPGPVEGSRVEGTGTRAGGGQQGGG
YRDQGRWRAAGWPSKAGPRLEGPLLGGPWLNPEELRSTVVVLYTLAGNTCFLRLSSGMEE
TVWEQHTVNLQRDSKMGFGIAVSGGRDNPNVDNGEMSIIVSDVLQGGPADGLLFEKDRVI
QVNSILMDNVPHSFAVQQLRKCGKTAKITVKRPRKVALHSLKHPPSPGGQSRDFGTTRYY
DADDNQSDGGWQRGNGGTGYTHEPRDLTPDNKNYLDPDYGSRGNRGRSRGRSQERASTSP
EHRRDNSKGRALDREPPSPERLRYPRDRSRGRSTDRERGGGGGSPGGRSYGRGNSYERGG
GRYGDVGGTGGRMVKSKSRDQLQEPSSPDLPRGGGGGGGARDLEPLEKPVNVLLVKNRPN
EEYGLRLGSQIFIKEMTSTGLATKDGNLQEGDIILKINGTVTENLSLNDAGKLIEKSRGK
LQLVIQRDRRQILIRIPPLVDSDSEPDDISEMESYHSYSPQEDRRSRHSDLSSHSSNERD
YPRPLTSLEDSPRVAKMSAMASPFRVPPLQDPPSPGPATLESEGLPRLDEPPASAKTTPK
ILLRPSPEEEELYGANTVMVSFQKGDSVGLRLAGGNDVGIFIAGIQEGSPAEEEGLRTGD
QIIKVNKVEFRGIVREEAVLCLLEIPKGEDVTILAQSKPDVYNEILVSGRGDSFFIRTHF
EYEREAPQSLAFSRGEIFKVVDTLYDGKLGNWLAIRTGKDKQLLEKGIIPNKSRADQMAS
VQNSHKAAGTDRADFWRLRGQRAAKRKELRKSREDVSATPVATRFPAYERVVLREAGFRR
PVVLFGPIADAANDKLANELPDLFIIAKTEPKDAGSEKSSGVVRLNTIRLIIEQDKHALL
DVTPKAVDTLNYSQWYPIVIFFNPDSKPGVKAMRQRVIPGSNRSARKLYEQAVKLRKTCS
HLFSATIELNSVNDAWYGSVKDSIREQQTQAVWVSEGKLDGTGTDLDLHDDRMSYLSAMS
ADYLSMDSRLASDYDDTADEGGAYTDNELDNEPADQLPVSAISRSSEPVLAEEVRDTRTH
SSRGYDSHSSSPASNDPLLSLAPSTPSASTAPVTVAPMGPGEPEENPEDPSLRSFLGKVK
AFEKMDHFARAQRMLELQEAQNARLEIAQKHPDIYAVPLKTQKLDHSRPQPIGSSSHPEP
QTPPSKLPYSESRGFYLSDEEEGYRRQLAEHTKRGYYQVNNQKYQDTEL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgaatctggactgcctgcagttgggggactggtgttcggcagcacgggggag
tccacggctgcaccacacggaggagggccagggtggagggtaccgggaccagggccggtg
gagggcagcagggtggagggtaccgggaccagggccggtggagggcagcagggtggaggg
taccgggaccagggccggtggagggcagcagggtggccgagtaaagctggacccaggctg
gaggggcctctcctgggaggaccgtggctcaacccagaggaattgagaagcaccgtggtg
gtgctctacactctcgctggaaacacctgcttcctccgactgagctcaggaatggaggag
actgtatgggagcagcacactgtgaacctacaaagggactcaaagatggggttcggtatc
gccgtgtcggggggacgggacaaccccaacgtggataacggagagatgtcaatcatcgtg
tcagacgtcctacagggtggaccagccgacggtctcctgtttgagaaagatcgtgtgatc
caggtcaactccatcctcatggacaacgtgcctcattccttcgctgtgcagcagttacgc
aaatgtgggaagaccgccaagataacggtgaagagaccgcggaaggtggctctccactcc
ctgaagcaccccccctctcccggcggccaaagtcgagacttcggcaccacccgttactac
gatgccgatgacaaccagagtgacgggggctggcaacgtggcaacggtgggaccggttac
acccacgagcctcgtgacctcacccccgacaacaagaactacctggaccccgactacggc
agccgcggtaatcgggggaggagtcgggggaggagccaggagagggcatcgacgagcccc
gagcatcgccgcgacaacagcaaggggcgggccttggaccgggagccgcccagtcccgag
aggctgcggtatccacgggatcgcagccgggggaggagcacggaccgggagagaggaggg
ggaggagggagtccaggtgggaggagctacggccggggcaacagttacgagcgtggaggg
gggaggtacggggatgtgggaggtactggagggaggatggtgaagagtaagagtagagac
caactccaggagccttcctccccggacctcccaagaggaggaggaggcggaggaggagct
agagacctggagcccctggagaaacctgttaacgtcctgctggtcaagaacagacccaac
gaagagtacggtctgcgcctgggcagtcagatcttcatcaaggaaatgaccagtacagga
ctggctaccaaggacggaaacttacaggagggagacatcattctcaagatcaatgggaca
gtaacagagaacctgtctctgaacgatgcagggaagctcattgagaagtctagaggaaaa
ctccagctggtcatccagagagaccggagacagatcctcatccgtatcccgcccctcgtc
gactctgactccgaacctgacgatatttcagagatggagtcctaccattcctactctccc
caggaggacaggagatctcgccactctgacctctcctcccattcctctaatgagagagac
taccccagacctctaaccagcctggaagactctccaagggtagccaagatgtctgccatg
gcctcacctttcagggttcccccgctacaggaccccccctccccgggccctgccaccctt
gaatcagagggtctgccacgcctcgacgaaccaccagcgtcagcaaagaccactcctaag
attctgctacgccccagcccagaggaggaagagctctacggggctaacacggtgatggtg
agtttccagaagggggacagtgtgggtctgaggctggcggggggcaacgatgtgggcatc
ttcatcgctggcatccaggagggcagtcctgccgaggaggagggcctacgcactggagac
cagatcataaaggtgaataaggtagagttccgaggcatcgtgagagaggaggctgttctc
tgtctgctggagattcctaaaggagaggacgtcaccatactggcccagagtaaacctgat
gtctacaatgaaatcctggtgtcgggtcgtggggactccttctttatcaggactcatttt
gagtatgagcgggaggccccccagagcctggctttctccagaggggagatctttaaggtg
gtggacaccctctacgacggcaagctgggcaactggctggccatccgcaccggcaaggac
aaacagctgctagagaagggcatcatccccaacaagagcagggctgaccagatggcgagc
gttcagaactcccataaggccgctgggacggaccgggctgacttctggcgtctgaggggt
caaagggcagccaagagaaaggagctgaggaagagcagagaggacgtcagcgctacgccc
gtcgccacacgcttccccgcgtacgagagagtcgtgctccgagaggctggtttcagacgt
cctgtggttctgtttggacctatagctgatgcagccaacgacaagcttgctaacgagctg
cctgacctgttcatcattgccaaaacggagcctaaagatgccggttcagagaaatcctca
ggagtagtgagactcaacaccatacgcctgatcatagagcaggacaagcatgccctgctg
gatgtgactcccaaggcggtggacacactgaactacagccagtggtaccccatcgtcatc
ttcttcaacccagacagtaaaccaggagttaaggccatgaggcagagggtgatacctgga
tccaaccgctcggcacgcaaactatacgaacaagctgtcaaactgaggaagacctgttct
cacctcttctctgctactattgagttgaactcggtcaacgatgcgtggtacggcagtgtc
aaggactctatcagagagcagcagactcaggctgtctgggtgtctgaggggaagctggac
ggcacggggacggaccttgatctccatgacgaccgcatgtcctacctgtcagccatgtcg
gccgactacctgagcatggacagccgactggccagtgactacgatgacacggcggacgag
ggcggggcttatacggataacgagctggacaatgaaccggccgatcaactgccggtgtcg
gctatcagccgctcctctgagcccgtactggcagaggaggttagagacacacgcacacac
tccagccgtggctacgactcccactcctccagccctgccagcaacgaccccctcctctcc
ctcgctccctcaactccttcggcaagcacagccccagtcacagtggcccctatgggcccg
ggggaaccagaggagaaccctgaggaccccagcctcaggtcattcctggggaaggtcaag
gccttcgagaagatggaccactttgcacgcgctcagaggatgctggagctgcaggaggca
cagaacgccaggttggagatagctcagaagcacccagatatctatgctgtccccctgaag
acccagaaactggaccacagccggcctcagcctataggttccagctcgcatcctgagccc
cagacccctccctccaagctaccgtactctgagagtcgtgggttctacctcagcgatgag
gaggaagggtaccgacgccaactggctgaacacaccaagagaggctactaccaggtcaac
aaccagaaataccaggacactgaactgtag
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integrated database retrieval system
