Oncorhynchus tshawytscha (Chinook salmon): 112237442
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Entry
112237442 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: lysosomal-trafficking regulator-like
KO
K22937
lysosomal-trafficking regulator
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112237442
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
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Others
112237442
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NCBI-GeneID:
112237442
NCBI-ProteinID:
XP_042161632
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Position
LG24:complement(32861661..32996159)
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AA seq
2653 aa
AA seq
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MVALGEYLVRGRGFLLLSALDSIIDQELTCREELLTLLLSLLPLVWKIPVQEEKAPDFTL
LSLLEVFLSQEVNAAPQRAGKDQKTGALHSEKQSRGGSSSSSTWKVLRRSRRTAQRYSVR
DARRSQLSTSDSDANSDNKAGTGGTGGVRSRRSRGSTIRVSCQHHRSEARLLPSPPVPPP
EKTMASPFPLYPQPRSLGGSQTTLDTETLTDPAAMSIFNRMENSPFDLCHVLLSLLEKVC
KFDMSINHNPGLAVSVVPTLTEILTEFGDCCGPGGGGEGVEELAGGWTEEPIALVQRMLL
RTILHLMSVDVGQSEALPDSLRRSLTDLLRATLKIRSCLERQVDPFAPRTKKTLQEVQED
FSFSRWRHRSLLLPELLEGVLQVLLGCLHASAPNPFFFSQALELLHEFIQHRGLELFEVT
VLRLEGLGRARDSEVGGEAADRLKGLLSGVLKIISSVKTAKSEQLHQSVCARRRHRRCEY
SHFLHHHRDLSGLPVSAFKQAARRNPFEETEGKEGLDDVVRYPERCCCLAACAHQCLRLL
QRLSSSGPAVLQVLAGVQAVGICCCMDPRSVVGPLLHAFQAPGLRSYQSHILSVLSRLIL
DQLGGGQPSEKAKLASCNICTLDSSQLPGLEETLQXGEVGVSSPTLSYRSHGILPSGGGA
EDMLWKWEALEAYQGLVFXEDQALSQQVAGHMCHLMLRGNTVVQWQLYTHIFNPVLQRGV
ELVHHAQQLGVSTACSQVCSYHVQCLPVEVLLVYLQTLPTLLKSRVIRNLFLSCNGLNQV
TELIYLDQTRAWALKVFEMLILGVGVEHQDPDPDPEHAKAQEREATLGLAEELGSRGAGS
TAGPIGEGGPQSLSKFYECLKEARPRSRIGQGAGRGRGRGETHLNTINLFLCVAFLCVSK
EADSDRDSVNDSEDTSGYDSTASEPLGGRLPCLSPDSVALPSKEQVRRAADVWSVCRWIY
LASPVFQRQFYRLGGLDVCSRLMTMLIQKLISHTSDGKAGKAKKKSDGKDKTHPDSSSAS
IPTSVLTGSTTTTLGVEDPGQHPAEAVSPGQGGQGEGKGTQKDPSRRLEEEWPQQSIRML
EALLAICLHSANSGLQKMEPELSFQLQSVEETLLEVRDQLSHSGVVNSDLAVPLFDLLLR
VALAEVCSSPEPQEDKAERKLAVCVESVVPAGDLSEAEEGDEVQGCGEAPVLGEEEGYEA
DSESNPEDMAKQEEGVKVDSAGGAGAGLGGVVAFGAKSPGRGGRGVLLFPEICLMELQLL
ASGSPDLEVLGHVFHSLLGAVRANPRNAALLYHQGAVKTILTAFQSILSQSDSSYEDCQT
VLVELLVAMMSQRITAEELALLIRLFHEKNPPTDILLKGVLQIVQANVDMEPLYFLSYPM
ILGGASFSGGTSPGSRQNGGAGGKGVGMLWKGGKLSPGRREGDGREEPGHLRTSPWHVAP
LHLPLVGQNCWPHMASGFSASVWIKVAKNEEGEGHTEKEEGKAPTLEPNLGTVPDGQRVV
EESLMHVLSMGSKAMMLQVWADLSTGVFTFRMCIDPNDEMKAGLLAQAESGEGLVSPGSW
HHLGISYTQQPEGKKNIHGRLALWVNGVRKCEVSLDYTLPRKSSLSSDSNKTFCLLGHCT
GHSEDVTRQGGQYDMGTVLLFNGSRIGSEEAFYLYASGPDLTSIMPCKYGKPSGTFSKYV
TTDRLKCDTVRELMMKNKDVDTAALIECLAVVYAPSSPRVYTIYEPVIRLKGQAKTMVSQ
RPFSSREVQSAVLETHILRTMLPAEPQGLQNVLHKIGGTGSFVFLFARVVELSDSEQTQA
LALQVLLSLAKYNQHRINEMDCYHGYSMIHQVLIKSKCIVGYHILKTLLDGSCSSPILTL
GDDGQFHLDTESTAVVQDIKLLSEVLLDWKIWAKAQGGVWETLLAGLEILIRVHHPQQVF
NIRQFLKAQVVHRFLLTCQVLQEHRDEHLTSIPQEVCLSFVKIIQEVLGSPPDLDLLRLV
YNFLLAVHPPTNTYVCHTPTSFYFSLHIDGNLYQEKVQSIMYMRNINSGWKSAGSSVVSL
STAVFTEDPLPEGTIHLQPPSPEHGGDDQSLSLLPANLTPSPNSSPLLRPCLGHGGAGSP
REGQEGEGVTLGSTETLKRGGGGVGEEQLLSSCESAKTICDSREGGEAPHTPSISIEEVE
VDGEEGVEERGEVDSLVEGSVGGAESEDRFDWASDEVPQRPDSLKGITSFQRSSSNLASL
GLAFPAQNGNLALGRWPSVADRGTLPEDWESYSYSPGYERAYSKDSSNDRSSTEDCLVLI
CYGLYDLLRGILLLLPDLMLHEVMDKLVQPEALIVLVNHSSPLIQQGVMKLLDAYFSRAF
KEQKEKFLKNHGFSLLANQLYLHQGTQGLLEVFLEMLFGRPVGLEEDLDLEDMETISPFR
KRCIIPVLGLIENSLCENSLVHNVLCMLLQLVNACPKLADILLDHGLLYVLFNTLSTLNG
MEHGIPLNDYKLLVVDIQQLLVAVTIHSCSSSGAQYFRIIEDLITLLGFMETSKMKRTQE
MAVALQFRVLQSAIEFIKTTANQDPQKLSSSVNVPTSSHHAIYQKRKSIAGRRRFSLAQS
DSLLTRMRSVASDELNQMMQRRMSQENPIRASETEFIQRLQRLVVLAVNRLIYHDVSQDF
YDLLNFPDSRTTT
NT seq
7962 nt
NT seq
+upstream
nt +downstream
nt
atggttgccctgggcgaatacctggtcaggggcaggggcttcttgctgctcagcgccctg
gattccatcatcgaccaggagctgacctgtcgagaggagctgctaaccctgctgctgtct
ctactgccactggtctggaagatacctgttcaggaggagaaggccccagatttcaccctg
ctgtctctgctggaagtgttcttgagccaggaggtgaatgccgccccccagagggcgggg
aaagaccagaagaccggtgcgttgcactctgagaagcagtcccgcggtggcagcagcagc
agctccacctggaaggtcctgcgtcgctcccgccgcaccgctcagcgctactccgtaagg
gatgctcgtcgctcccagctctccacctctgactcagacgccaactctgacaacaaggcc
ggcaccggtggcaccggtggagtgcgtagtcgacgttctcgcggttctacgatccgtgtg
agctgccagcatcaccgttcggaggctcgcttattaccctcgcctcctgtcccccctccc
gaaaagaccatggcttcgcctttcccgctctacccccaacctcggtcgctgggggggtcc
cagaccaccctggacacagagaccctgactgacccagctgccatgtccatattcaacagg
atggagaactctcccttcgacctctgtcatgttctgctctcgctcctggaaaaggtgtgt
aaatttgacatgagcatcaaccacaacccgggtctggctgtcagtgtggtaccgaccctc
actgagatccttaccgagtttggagactgttgtggtccggggggaggaggagagggggtg
gaggagctggctggaggctggacagaggaacccatcgccctggtccagaggatgctgcta
aggaccatcctccacctgatgtcagtggacgtgggtcagagtgaggctctaccagacagc
ctgcgacgcagcctgaccgacctgctcagagccacgctgaagatcaggtcctgcctggag
agacaggttgacccattcgctcccagaaccaagaagaccctgcaggaggtgcaggaggac
ttctctttctcccgctggaggcaccgctccctgctgttacctgagctgctggagggtgta
ctgcaggtgctgttggggtgtctccatgcctcggcccccaatcccttcttcttcagtcaa
gcgctagagctgcttcatgagttcatccagcatcgcggcctggagctgtttgaggtcacc
gttctgaggctagaagggctgggccgcgcccgggattctgaggtggggggtgaggcagca
gatcgtctaaaaggactcctctccggggtcctaaagatcatcagctccgtgaagaccgct
aagtcagagcaactgcaccagtccgtctgcgcccgccgtcgccaccgtcgctgtgaatac
tctcacttcctgcatcatcaccgcgacctctccggactccccgtctctgctttcaaacag
gccgcccgccgtaaccccttcgaagagaccgaggggaaggaggggttggatgacgtggtg
cgttacccagagaggtgctgttgcctggcagcctgtgcccaccagtgtctccgtctgctc
cagcgcctgtcctccagtgggccagcggtgctccaggtcctagctggggtccaggctgtg
gggatctgctgctgtatggaccctcggtctgtagtcggccctctcctccacgccttccag
gccccagggctccgctcctaccagtcccacatcctctctgtcctctcccggctgatcctg
gatcagttaggtggtggccagccctctgagaaagctaagctagcctcctgtaacatctgt
actctggacagcagtcagctgccgggcctggaggagacgctccagncaggggaggtcgga
gtgtcgtcccccactttgagctaccgttcccatggtatcctccccagcggagggggagca
gaggacatgctgtggaagtgggaggccctggaggcgtaccaggggctggtgttcngggag
gaccaggcactcagccaacaggtcgcgggacacatgtgtcacttgatgttgagagggaac
actgtggtccaatggcagctctacactcacatcttcaaccctgtactgcagaggggggtg
gagctagtgcatcacgcccaacaactgggtgtgtctacagcgtgtagccaggtgtgctcc
taccacgtccagtgtctacctgtagaggtgctactggtctacctgcagacactaccaacc
ctgctcaagtccagggtcatcaggaaccttttcctgtcctgtaacggtctgaaccaggtg
actgagctcatctacctggaccagacccgggcctgggccctcaaagtgtttgagatgtta
atacttggagttggagtggagcaccaggacccggacccggacccggagcatgccaaggcc
caggagagagaggccacgctcggcctggctgaggagctggggtcccgtggggccggaagt
accgcaggtcccataggagaggggggcccacagagcctgtctaagttctacgagtgtcta
aaagaggcgcgcccaaggagccggattggtcaaggggcaggaagggggaggggccgggga
gagacccatctgaacaccatcaacctcttcctgtgtgtggcgttcctctgcgtcagcaag
gaggccgactcggaccgtgactcggtcaacgactcggaggatacgtcagggtacgacagt
acggcttcagagcctctgggagggagactcccctgcctgtcacctgacagcgtggccctg
ccctccaaggaacaggtgcggcgtgctgctgacgtgtggtcggtgtgtcgctggatctac
ctggcgagtcccgtgttccagagacagttctaccggctggggggactagatgtctgttcc
cgcctcatgaccatgctcatccaaaaactcatctctcacacctcggatggcaaggcaggc
aaggccaagaagaagagtgatggaaaggacaagactcaccctgactcctcctctgcctct
ataccaacctcagttctgacaggttcaaccaccaccaccctgggagtagaggatccaggc
cagcacccagctgaagctgtgagcccaggccagggtgggcagggagagggtaaggggacc
cagaaggatccttccaggaggctggaggaagagtggcctcaacagagcatcagaatgctg
gaggccctgcttgcgatctgcctgcacagcgctaactcaggcctgcagaagatggaacct
gaactttcattccagctccagtcagtggaggagaccctgctagaggtcagggatcagttg
tcccactctggggtcgtgaactctgatctggctgtgcccctgtttgacttactcctccgt
gtggccctggccgaggtctgctccagtcccgaaccccaggaggacaaggctgagaggaag
ttagcagtgtgtgtggagagtgtggtcccggcgggggatctatctgaggctgaggaggga
gacgaggtgcaggggtgtggtgaggctccagtgctgggggaggaggagggatacgaggca
gacagcgagagcaacccagaggacatggccaagcaggaagaaggtgtgaaggtggattca
gcaggcggagcgggggccgggctgggtggagtggttgcgtttggggcgaagtcccccggc
agagggggccgtggcgttcttctcttcccagagatctgcctgatggagctccagctgctg
gcgtcagggtcacctgatctggaggtgttgggtcacgtgtttcacagcctcttgggggcc
gtgagggccaacccccgcaacgctgcgctgctgtaccatcagggagcggtgaagaccatt
ctgactgctttccagagcattctgtcacaatcagattccagctatgaagactgccagacg
gtactggtggaactgctggttgccatgatgagccaacgaatcacagccgaggaactggcc
ctgttgatccgcctcttccatgagaagaatccgcccactgacatcctactgaaaggcgtc
ctccagatcgtccaggccaacgtggacatggaacctctctacttcctctcctatcctatg
atcctcggcggcgcatctttctctggcggtacctcccctggctcccgacaaaatgggggg
gcgggggggaagggggtcgggatgctgtggaagggggggaagctgtccccgggacgcagg
gagggggatggaagagaggaaccaggacatctcaggacctctccgtggcacgttgccccg
ttacacctccctctggtggggcagaactgctggccacacatggcatctgggttctctgcc
tctgtctggataaaggtggctaagaatgaagagggagagggacatacagagaaggaggag
gggaaggctcctacgttggagcccaacctggggaccgtccctgatgggcagagggtggtg
gaggagagcctgatgcacgttctctccatgggctccaaagccatgatgctgcaggtctgg
gctgacctctccacgggagtattcactttcaggatgtgtattgaccctaatgatgagatg
aaggcggggctactggcccaggcagagtcaggggaggggctagtctcacctggcagttgg
catcacctgggtatcagctacacccagcagcctgagggcaagaagaacatccacggacgc
cttgccctatgggtcaacggagtcaggaagtgtgaggtgtctctggactacacgttaccc
aggaagtccagcctgtcttcagacagcaacaagaccttctgtctgctgggacactgtacg
ggacacagtgaggacgtgaccagacagggtggacagtacgacatgggcactgtgctgctc
tttaacggctcccgtatcgggtcagaggaggcattctacctgtatgcctctggtccagac
ctcacgtctatcatgccctgtaagtacggtaagcccagtgggaccttctccaagtacgtc
accacggacaggttgaagtgtgacactgtcagagagctaatgatgaagaacaaggatgtg
gacacagcagctctcatagagtgtctggcagtagtgtacgcccccagcagccccagggtg
tataccatctatgagccagtgatccgtctgaagggtcaagctaagaccatggtgtctcag
agacccttcagctctagagaggtccagtctgcggtgctggagacacacatcctcaggacc
atgctgcctgcagaaccacagggcctgcagaatgtcctccacaagataggaggaaccggg
tccttcgtattcctctttgcacgggtggtggagctaagtgacagcgagcagacccaggcc
ctagccctccaggtgctcctctctctggccaagtacaaccagcaccgtatcaatgagatg
gactgttaccacggttactccatgatacaccaggtcctcatcaagtccaagtgcatcgtg
ggataccatattctcaagaccttgttagatgggagctgtagtagtcctatcctaactcta
ggggacgacggtcagttccacctggacacagagtctacagccgtggtccaggacatcaag
ctactgtctgaggttctgctggactggaagatctgggccaaggcgcagggtggtgtctgg
gagactctgctggcagggttggagatcctcatcagggttcaccacccccagcaggtgttc
aacatcagacagtttctcaaagcccaggtggtccaccgcttcctgctcacctgtcaagta
ctacaggagcatcgggacgagcacctgacctccatcccacaggaagtgtgtctgtctttc
gtaaagatcatccaggaagtgttgggttcacctccggacctagacctcctccgattggtc
tacaacttcctcctcgccgtgcacccgcccactaacacctacgtctgtcatacgcctaca
agcttctacttctcactacacatagatggtaatctgtaccaggagaaagtccagtccata
atgtatatgagaaatatcaacagtggatggaagtcagctggtagctcagtggtctctctc
tccacggccgtcttcactgaggaccctcttcctgaaggtaccatccaccttcagcctccg
tcacctgaacacggaggagacgaccagtccctgtccctcctgcccgccaacctgaccccc
tcgcccaactcctccccgttgctcaggccctgtctgggccatggaggggctgggagcccc
agggagggccaggaaggagagggggtgactttgggaagcacagagactctaaagagagga
ggaggaggggtgggggaggagcagctcctgtcaagctgtgagtcggcgaaaaccatctgt
gactcccgagagggaggagaggcaccgcataccccgtccatcagtatcgaggaggtggag
gtagatggggaggagggggtggaggagaggggggaggtggatagtctggttgagggcagt
gtgggcggtgctgaatctgaggaccgtttcgattgggcgagcgatgaggtgccacagagg
ccggacagtctgaaggggatcacatcgtttcagaggagctcctctaacctggccagcctg
ggcctggccttccctgcccagaatgggaacctagccctgggtcgctggcccagcgtggcc
gaccgtgggacactaccagaagactgggagagctactcatactcacctggatacgagagg
gcctacagcaaagactctagcaacgacaggtccagtacagaggactgcctggtgttaata
tgctatggtctatatgacctgttgagggggattctgctactactaccagacctgatgctg
cacgaggtgatggataagctggtccaacctgaagctcttatcgtcctcgtgaaccactcc
tctccccttatacagcagggggttatgaagctcctggatgcctacttcagccgagcgttt
aaggagcagaaggaaaagttcctgaagaaccatggcttcagtctcttagccaatcagctg
tacctgcaccaggggactcagggcctgctggaggtcttcctggagatgctgtttggacga
cctgtcggcctcgaggaggatctagacttggaggacatggagaccatcagtcccttcagg
aagcgttgtatcatcccagtgctgggcttaatagagaacagtctgtgtgagaacagtctg
gtccacaacgtgctctgtatgctactgcagctcgtcaacgcctgtcccaaactggctgac
atactgctggaccacggcctgctctacgtcctcttcaacaccctgtcgacactcaacggc
atggagcacggtatacctctgaacgactacaaactactagtggttgatatccaacagctc
ttggtggcggtgaccatccattcctgttcttcctctggtgctcaatacttcaggatcata
gaggacctaatcacactgctgggcttcatggagacgtccaagatgaaacgaacccaggag
atggcggtggccctgcagttccgcgtcctccaatcagctattgagttcataaagacgaca
gctaatcaggaccctcagaagctgagcagctctgtcaacgtgcccacctcttctcaccat
gccatctaccagaaacgcaagagcatcgcaggtcggcgtcgcttctccctggcccagtca
gacagccttctgaccaggatgcgttctgtagccagtgatgagctgaaccagatgatgcag
agaagaatgagtcaggagaaccccatcagagcatcagagactgagttcatacagagacta
cagagactggtggtgctggctgtcaacaggctcatttatcatgacgtgagccaagacttc
tacgacctgttgaacttcccagactcccggaccaccacctga
DBGET
integrated database retrieval system
