Oncorhynchus tshawytscha (Chinook salmon): 112238331
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Entry
112238331 CDS
T05605
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112238331 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112238331 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112238331 (iars1)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
112238331 (iars1)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112238331 (iars1)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
112238331 (iars1)
Prokaryotic type
Other AARSs
112238331 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112238331
NCBI-ProteinID:
XP_042180846
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All DBs
Position
LG07:complement(72451547..72560335)
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AA seq
1344 aa
AA seq
DB search
MVEPVPESIHFPSEEKRILQLWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDVVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLDIKGPDDVAKMGIAEYNRQC
RMIVMRYANEWENSVTRMGRWIDFKNDYKTLYPWFMETVWWVFRQLYDKGLVYRGVKVMP
FSTACNTPLSNFESNQNYKDVQDPSVIVNFPLLEDENVCLIAWTTTPWTLPSNLALCVNS
ELQYVKVKDNSTGKVYIMMEARLVALFKTEEEYTIMDKFPGKTLKGKKYKPLFDYFRKCG
ETGAFQVVMDSYVREEEGTGVVHQAPYFGADDYRVCMENNICQRDQAPVCPVDSSGCFTD
DVTDFVGQYVKDADKNIIKWLKERGRLVNSGSFKHSYPFCWRSDTPLIYKAVPSWFIRVE
HMVEKLLENNDKCYWVPEFVRERRFGNWLRDARDWAVSRNRYWGTPIPLWCSDDFEEVVC
VGSMAELEELTGVKVTDLHRESIDQLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQAHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLVVENYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLHKEDGISFLYNEATAKRSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRFKGESGTEDCLGALENLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPTSVEEKDSSSIHYLMLPLVRESLIDKRIESAVCQMQSVIELGRVIRDRRT
LPVKYPLKEVVVIHQDPEALRDITSLQKYILEELNVRQLTLSTDKDKYGISLRAEPDHMV
LGKRLKGAFKSITASIKELKSEQLETFQKTGSIVVDGQELHEEDLRLMYSFNQTSGSATQ
YETHSDSQVHTHTHTHTHTHTHTHTHTHTHTHTHTHTASTRPLGQRHSTRPILTHRYTHT
HTHTHSFNQTSGSAKQYEAHSNSQVLVLLDVTPDQSMLDEGVAREVINRIQKLRKKGHLV
PSDEITVYYSCEPAGDYLDHVIQAHTDFILATTKAPLKTYPVPKDSSVIVQEKTQLKGSD
LDLTIVKGAAAARVPLTGPACAYINLQLKLNNKEQEGVVLLENPKGDICLDMAKLRQVCS
SLFGLNNTKLCVFNGKTELTGKCDLLSLNGKTLSVTSGSNPSDSSPNSDTLVCPYVNLQL
ANCQPAECQSGDVGTLLLVNPVGHDYLTHNALLSETAKLFGLRGRRLKLYLDDALTQEIP
AEWSMKTLDRKTLYVGVLPTTAEA
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcctgttcctgaatccatccacttcccttctgaggagaagaggatcctgcag
ctgtggaaggacaaggactgcttccaggagtgtctcaaacagtccaagaacaggcccaag
tacacgttctatgacgggcctccgttcgccacaggtctcccccactacggtcacatcctg
gcagggaccatcaaagacgtcgtgactcgcttcgcccaccagagcggcttccacgtggac
cgccggttcggctgggactgtcacggcctgcctgtggagtatgagattgataagaccctg
gacatcaagggaccggacgatgtggccaagatggggattgctgagtacaaccggcaatgc
aggatgatcgtcatgagatacgctaacgaatgggagaactctgtaaccaggatgggacgg
tggattgactttaagaacgactacaagactctgtacccctggttcatggagactgtctgg
tgggtgttcaggcagctgtatgataaaggtctcgtgtaccgcggggtgaaggtcatgccc
ttctctaccgcctgtaacacgccgctgtccaacttcgagtctaaccagaactacaaggat
gtgcaagatccgtcggtgatagtgaacttcccccttttggaagatgagaacgtgtgtctg
atcgcctggacaaccacaccctggactctgcctagcaacctggctctctgcgtcaactca
gagttgcagtatgtcaaggtcaaagacaacagcactgggaaggtgtacattatgatggag
gccaggctggtagcactcttcaagacagaggaggaatacaccatcatggacaagttccct
gggaagacgctgaaggggaagaaatacaagcctctgtttgactatttcaggaagtgcggg
gagacgggggccttccaggtggtgatggacagttatgtcagagaggaggaggggacagga
gtcgtccaccaggcgccatactttggagctgatgattaccgtgtgtgtatggagaacaac
atctgccagagagaccaggctcctgtctgtcctgtcgactcctctgggtgcttcactgat
gacgtcactgactttgtgggacagtatgtcaaggatgctgacaagaacatcatcaaatgg
ctgaaggaaaggggtcgtctggtcaacagcggctctttcaagcatagctaccctttctgt
tggagatctgacacccctctgatctacaaggctgttcccagctggtttattcgggtcgaa
cacatggtggagaagctgctggaaaacaatgacaaatgctactgggttcctgagtttgtg
cgggagcgtcgttttggtaactggctgagggatgcgcgtgattgggccgtttccaggaac
cgctattggggcacgcccatccccctctggtgcagcgacgactttgaggaggtggtgtgt
gtaggatccatggctgagctggaggagttgacaggagtgaaagtaactgatctgcatcgg
gagagcattgaccagttgactatcccgtcccgctgtggtaaaggcgtgttgcgcagggtc
actgaggtgtttgactgctggtttgagtcgggcagcatgccctacgcccaggcccactac
ccctttgagaacaggaaggagttcgaagacaccttccccgctgacttcattgctgagggc
atcgaccagaccagaggatggttctacaccctcctggtgttgtccacagctctgtttgga
aaaccaccgttcaagaacgtcatcgtcaacggactggtgctggccagcgatggacagaag
atgagtaaacgcaagaagaactaccctgatccaggtctggttgtggagaactatggagct
gatgccctgaggctctacctaatcaactccccggtagtgagagctgagaaccttcgtttc
aaagaggaaggagtcagagatgttctgaaggatgtgttcctcccctggtacaacgcctac
cgcttcctggtccagaacgtccagcgtctccacaaggaggacggcatcagcttcctgtac
aacgaggccacagccaagcgcagtgacaacatcatggacaaatggatccagtccttcacc
cagtctctcatccagttcttcaaagctgagatggatgcttacaggctgtacacggtggtg
ccaaagcttgtcaagtttgtggacatgctgaccaactggtacgtgaggactaaccgtagg
cgtttcaagggagagagtggaacagaggactgtctgggggctctggagaatctcttcagt
gttctgttctccatgtgcagactgatggctcccttcaccccatttattacagagatgatg
taccagaacctgcgtcacctgatcgaccccacctctgtagaggagaaggactccagtagc
atccactacctcatgctgcctctagtcagggagtcgttgattgacaagcgtatagaaagt
gcggtgtgtcagatgcagtctgtcattgagcttggacgagtcatcagagaccgcaggact
ctgcccgttaagtatcccttaaaggaggtggtagtgatccaccaagatccagaagctctg
agagacatcacctccctgcagaaatacatcctggaggagttgaatgtccgccagttgacc
ttgtccacggacaaagacaagtacggcatcagcctgcgggctgaaccggaccacatggtg
ctgggaaagaggctgaaaggagccttcaaatccattacggcgtccattaaagaactgaag
agcgaacagctggagaccttccagaagactggctccatcgtggtggacggtcaggagctt
catgaggaagacctgaggttgatgtacagcttcaaccagacctctgggtcagcgacacag
tacgagacccattctgactcacaggtacacacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacacacacacacacacacacacacagcttcaacc
agacctctgggtcagcgacacagtacgagacccattctgactcacaggtacacacacaca
cacacacacacacacagcttcaaccagacctctggctcagcgaagcagtacgaggcccat
tctaactcacaggtgctggtgctgttagacgtcactccagaccagtccatgctggatgag
ggtgtggctcgtgaggtcatcaaccgcatccagaaactacgcaaaaagggtcacctggtg
ccgtctgatgagatcacagtgtactacagctgtgagccggcaggtgattacctggaccat
gtgatccaggcccacacagacttcatccttgcaaccaccaaggcaccactcaagacttac
cccgtccccaaggactccagcgtcatcgtgcaggagaaaacacagttgaagggttcagac
ctggacctgaccatagtgaagggagcagccgccgctcgagttcctctgactggaccagcc
tgtgcctacatcaacctccaactcaaactcaacaacaaggaacaagagggtgtggttctc
ctggagaaccctaaaggagatatctgtctggacatggccaagctgagacaggtctgctcc
agtctctttggtctcaacaacactaagctctgtgttttcaacggcaagactgagttgact
ggtaagtgtgatctgctgtctctgaatgggaaaaccctgtcggtgacatcaggctccaat
cccagtgactcctctcccaactctgacactctggtgtgtccctacgtcaacctccaactg
gccaactgtcagcctgctgagtgtcagagtggagatgtggggaccctgctgctggtcaat
cctgtcggacacgactacctgacccacaatgctttgctgtctgagacggctaagttgttc
ggcctccgcggccgtaggctgaagctctacctggacgatgcgctcacccaagaaatccca
gcagagtggtcaatgaagacgctggacaggaagactctgtacgttggagttctgcccacc
actgcagaggcatag
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integrated database retrieval system
