Oncorhynchus tshawytscha (Chinook salmon): 112238730
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Entry
112238730 CDS
T05605
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a
KO
K16798
zinc finger protein GLI2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112238730 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112238730 (gli2a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112238730 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
112238730
NCBI-ProteinID:
XP_024263038
UniProt:
A0A8C8BYE8
LinkDB
All DBs
Position
LG03:complement(52178241..52285523)
Genome browser
AA seq
1518 aa
AA seq
DB search
METSAPTATEKKEHKGSGLDGSSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHTMHGHHGLAGSPVISDGISLIRLSPHAAGTGDSPFSPPHSYVHPQMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKEHGLFSLPPPPPGANPTDYYHLMASGRSTYG
DLIMQTGAAAAAAAHLPDYISPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIR
TSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHPINPMAYQQLLNQQRGLSAFG
HTPPLIQPSPSFAARQHAHALAASTLNTTHNTSSSESNQNAGGDPAVSSTVNPMITKRHK
VKTEAEGPRPISPCFQEHVLDLSEELDKDECKQEPEAVYETNCHWVGCSKEYDTQDQLVH
HINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSR
LENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYT
DPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSRRGMDGKMEANSTI
RGAEDCLQVKSIKTENSITYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSFGDL
SALDDPPMVDSSTLSPRNSVGMGLGLHKGGGVTIKLENIKKERLKNVRDSCPWANSGPQA
PQVRNTKLPPIPAVGSLLENSNMIAPPGPYPGQRLGDLSSCEVTMLNQLNEQGRRDSITS
TASSAYISRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEASQCG
GGGGNLSSLLSLTPAQHYHLKAKYAAAIGGAPPTPLPNMERMSLRTRMALYGDHSQERES
LSHSQLFHPPAAAVPRRCSDIGYGSHSMMPHEVPGNLPRRASDPVRRPTLDPLSLPRVQR
YNSMNSMNPNSMMPPPSADRRGLAMQSYTRSDGSLHHHPFAPRPPSISENVVMETMAVDG
LDHAGDEDMVLPDDVVQYLRSQNTGPGQSAGPANYANSQSQGGFQVQGNMTSSQQQFYGQ
RRMAMVDANMPLSGSSQVPLPPYQMSPGSGSQQQQYPASHSMNNKNNMPVQWNEVSSGTV
DATATSRLTKQNLLRNNNLAMVQQRQNFGHFQGRMGSNSNQQVMPMNQNMALQGYTQRSN
SQWINSVQQQQRQPCSMNYPEQMSPQQGYGQEIIPVPNSGSGNGSFRPNFNGMALPNGRV
MATPNNPDTQIYRSRTPVESYAPHMIQVDQQNYSISSQQQDVNTGNRAGMQPRPPMEPKS
MSSRQHSGSRGMIQQNRFPQSDLHHNTSEASPKRPGSTAAHTGGHNRDSNSNASMFYAGQ
IQMFEPNNNHNVSFNSPMSPVMGQTPGGTTVTMASPGVNQVTSTVDSSGSSGSISGVEHA
QIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRNSVTLASVPAGIGNMAIGDM
SSMLTTLAEESKFLNMMS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgctccgacagccactgagaaaaaggagcataagggatcgggtctagat
ggaagcagcttctcagacctgccaaagaaaccatctcccactactgtgaccagaggtcct
caccatctcttccccacgtttcacacaccgatcccaatcgatatgcgtcaccacgagggg
aggtaccattacgagccacatcccctccacaccatgcatggacatcatggcctagcaggc
agcccggtcatctcagacggcatctctctgatccgtctgtccccccacgcagcagggact
ggggattcccccttcagcccccctcactcctacgtccacccccagatggagcactacctc
cgctccatgcacagcagccccaccctctccatgatctctgctgcccgcggactcagccct
gcagaagtgacccatgagcacctgaaggagcatggtctgttcagcctgccccctccacct
ccaggtgccaaccctacagattactaccacctcatggccagtggcaggagcacttacgga
gacctcatcatgcagaccggggcggccgcagccgcagcagcacacctgcccgactacatc
agccctgtggatgtgtcccggttctccagccccagactgacccccaggctgaacagaaag
cgagccctgtccatctcccctctctcagacgccagcatcgacctgcagaccatgatccgt
acctcgcccaactccctcgtggcctacattaacaactcacgctccagctctgcagccagc
agctcctacggacacctgtccgtcagcggcatcagtccgtcattcaccttcccccacccc
atcaaccccatggcctaccagcagctgctcaaccagcagagaggcctgagtgcgtttggc
catactcctccccttatccagccctcgccctcctttgctgcccgccagcatgcccacgcc
ctggcagcctccaccctcaacaccacccacaacacctccagctctgagtccaaccagaat
gctggtggtgacccggcggtgagcagcacagtcaaccccatgatcaccaagaggcacaag
gtcaagacagaagcagaaggaccccggcccatatcaccatgctttcaggagcatgtcctg
gacctgagtgaggagctggacaaagatgagtgtaagcaggagccagaggctgtctacgag
accaactgtcactgggtcggctgcagcaaggagtacgacacccaggaccagctcgttcat
catatcaacaatgaccacatccatggggagaagaaggaatttgtatgtcgctgggatgag
tgctcgcgggaacagaaacccttcaaggctcagtacatgctggtggtccatatgaggaga
cacactggagagaagccacacaaatgcacatttgaaggatgctgtaaggcctactctcgc
ctggagaacctgaagacccatctgaggtctcacacaggggagaagccttacgtctgtgaa
cacgagggctgcaacaaagccttctccaacgcctcagacagagccaagcaccagaacaga
actcactccaatgagaaaccctacatctgtaagatccctgggtgcactaagcgctacaca
gaccccagctctctcaggaagcatgtgaagacggtccacggacctgaggcccacgtcacc
aagaaacaacgtggcgatgtgccccccaggggtcctcctaaggggaatggagagaacgag
gcaaacgccaaacagagtcgtagagggatggatggaaaaatggaggccaacagcaccatt
agaggagcagaggactgcctgcaggtcaagtcaatcaagacggagaactcaataacgtat
caatccagcccgggcggtcactcgtcatgtagcagtgagccgtcgccacttggcagtgcc
cacaacaatgacagtggagtagagatggccctgcacagtgggggcagctttggggacctg
agtgcactggatgaccctcccatggtggactcctccaccctctccccccgcaactcggtg
gggatgggtcttgggcttcataaagggggaggagtcaccatcaagctggagaacatcaag
aaggagaggctcaagaatgtgagggactcttgtccctgggccaactctggtcctcaggca
cctcaggtccgaaacaccaagctgcctcccattcctgctgttggttcccttctggaaaac
tctaatatgatcgctccacccgggccctaccctggtcagcgtcttggtgacctgtcatca
tgcgaggtgaccatgctgaaccagttaaacgaacagggccgccgggacagcatcaccagc
actgccagctcagcctacatcagccggcgctcctctggcatctccccctgctactccagc
cgccgctcctccgaagcctcgcagttcagcaaccgccacaacaacatcagctcagccgac
tcctacgaccccatctccacagacctgtcccgtagatccagcgaggccagccagtgtgga
ggtggaggtggaaacctctctagtttgctcagcctcacccctgcccagcactaccatctc
aaggccaagtacgctgcagcaatcgggggagctccacctacacctctgcccaacatggag
cgtatgagcctcaggaccaggatggccctgtacggggaccactcccaggaaagagagagc
ttatcccactctcaactgttccacccacctgccgcagcagttcccagacgctgcagcgac
attggctatggtagccatagcatgatgccccacgaggtccctgggaaccttccccggcga
gccagcgaccccgtccgcagacctaccctagacccactatcccttccacgagtccaacgc
tacaacagcatgaacagtatgaaccccaacagtatgatgcctcctccctctgctgaccgc
cggggcctggccatgcagagctacacgcgatccgacggaagcctgcaccaccaccccttc
gccccacggccccccagcatctcagagaatgtggtgatggagaccatggccgtggacggg
ctggaccatgcaggagatgaggacatggtgttgcctgatgatgtcgtacagtacctcagg
tctcagaacactggccccggccaatcagcaggccccgccaactacgccaacagccaatca
caaggcggcttccaggtccaggggaatatgacctcctcccaacagcagttctatgggcag
aggaggatggccatggtggatgccaacatgcccctgtctgggtcaagccaggttccccta
ccgccctaccagatgagccctgggtctggctcccagcagcagcagtacccagcctctcac
agtatgaacaacaagaacaacatgccagtccagtggaacgaggtcagctcagggactgtg
gatgctacagccacctccagactcaccaagcagaacctcctcagaaacaacaacctggcc
atggtccaacagagacagaactttgggcatttccagggtagaatgggtagtaacagtaac
cagcaggtgatgcccatgaaccagaatatggcgctacaaggctacacccagagaagcaac
tcccagtggatcaactctgtccaacagcaacaaaggcagccatgcagcatgaactatcct
gagcagatgagtccccagcagggatatggccaagagatcatccctgtccctaactctgga
tctgggaatggcagctttcgacccaactttaatggcatggcactgcccaacggcagggtg
atggctacacccaacaatcctgatacgcagatctacaggtcaaggactccggttgaaagc
tatgccccccacatgattcaggttgaccagcagaactacagtatttcttctcagcagcaa
gacgtcaatactgggaacagagctgggatgcagcccaggcctcccatggagcccaagtct
atgagcagtagacaacactcagggtccagaggtatgattcagcagaaccgtttccctcag
tcggacttacatcacaacacctctgaggccagtccaaagagaccgggtagcaccgcagca
cataccggcggacataacagagactcaaactccaatgcttcaatgttttatgctggccag
atccagatgtttgaacccaataacaaccacaatgtgagcttcaactcgcccatgtccccc
gtcatgggccagactccgggaggcaccactgttaccatggcatctccaggggtcaaccag
gtcaccagcaccgttgactcatccggctcctctggatcgatctctggcgtggagcatgcc
cagatcgactttgacgccatgttggatgatggagaccactccagcctgatgtcagggacc
ctcagccccggactcctcaccagcctgtcccagaattcctctaggcttaccaccccccgt
aactctgtgaccctggcttctgtgccagcagggattggtaatatggccatcggagacatg
agctccatgttgaccaccctggctgaggagagcaagttcctcaacatgatgagctaa
DBGET
integrated database retrieval system
