Oncorhynchus tshawytscha (Chinook salmon): 112240903
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Entry
112240903 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
otw04145
Phagosome
otw04210
Apoptosis
otw04510
Focal adhesion
otw04520
Adherens junction
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw04814
Motor proteins
otw04820
Cytoskeleton in muscle cells
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112240903
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112240903
09143 Cell growth and death
04210 Apoptosis
112240903
09144 Cellular community - eukaryotes
04510 Focal adhesion
112240903
04520 Adherens junction
112240903
04530 Tight junction
112240903
09142 Cell motility
04814 Motor proteins
112240903
04820 Cytoskeleton in muscle cells
112240903
04810 Regulation of actin cytoskeleton
112240903
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112240903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112240903
03019 Messenger RNA biogenesis [BR:
otw03019
]
112240903
03036 Chromosome and associated proteins [BR:
otw03036
]
112240903
03029 Mitochondrial biogenesis [BR:
otw03029
]
112240903
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112240903
04147 Exosome [BR:
otw04147
]
112240903
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112240903
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
112240903
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
112240903
NuA4 complex
112240903
Chromatin remodeling factors
BAF complex
112240903
PBAF complex
112240903
GBAF(ncBAF) complex
112240903
SWR1 complex
112240903
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
112240903
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
112240903
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112240903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
112240903
NCBI-ProteinID:
XP_042170729
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYXGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagatgacgcgcctcgggctgtcttcccctccatcgtggggcgtcccaggcat
cagggagtgatggttgggatgggccagaaagacagctacgtgggagacgaggctcagagc
aagaggggtatcctgactctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagtggctccagaggag
caccccgtcctgctcactgaggcccccctcaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtacgtggccatccaggccgtgttg
tccctgtacgcctctggccgtaccaccggtatcgtcatggactccggtgacggcgtgacc
cacacagtacccatctacgagggctacgccctgccccacgccatcctgcgtctggatctg
gccggccgtgacctcacagactacctgatgaagatcctgacggagcgcggctacagcttc
accaccacggccgagagggaaatcgtacgagacatcaaggagaagctgtgctacgtggcg
ctggactttgagcaggagatgggcaccgctgcctcctcttcctctctggagaagagctac
gagctgcctgacggacaggtcatcaccatcggcaacgagaggttccgctgcccagaggcc
ctcttccagccctccttcctcggtatggagtcttgcggtatccacgagaccacctacaac
tccatcatgaagtgtgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggaggaaccaccatgtacnccggcatcgctgacaggatgcagaaggagatcacctctctg
gccccctccaccatgaagatcaagatcatcgcccccccagagcgtaaatactccgtctgg
atcggaggctccatcttggcttctctctccaccttccaacagatgtggatcagcaagcaa
gagtacgacgagtctggtccctccatcgtccaccgtaaatgcttctaa
DBGET
integrated database retrieval system
