Oncorhynchus tshawytscha (Chinook salmon): 112241181
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Entry
112241181 CDS
T05605
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2 isoform X2
KO
K08540
pregnane X receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112241181 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112241181 (nr1i2)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112241181 (nr1i2)
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
112241181 (nr1i2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Glyco_hydro_4C
SR-25
Motif
Other DBs
NCBI-GeneID:
112241181
NCBI-ProteinID:
XP_024265105
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Position
LG03:complement(63359890..63378249)
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AA seq
453 aa
AA seq
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MSKENLSDWPPSQTSTEEEEEEEDDGEPKVCQVCGDQATGYHFNAMTCEGCKGFFRRAMK
HPTKFCCPRQGVCVITKNNRRQCQACRLHKCQSIGMLKELIMSKEAVEKRRSQIRRNRMV
EEPPVLSPQQEAVIQELFNAHEKTFDITFSHFQFRPIDRDLNPMSVWNQTASGQSVKQTR
RMDNLSSSYSTSTSTSFSSSSCSLEDEEKDRSDGGKNTVFTTLPDVADLTTNMEEKKEEE
KKEDRSDGGKNTVFTTLPHIADLTTYMIQNIINFAKGLPSFRALAIDDQISLLKGAMFEM
MQIRFNMMFNVKTGIWECGPLTYCMDDAVRAGFQRHLLDPLMRFHYTLRNLQLQEVEYVL
MQAISLFSPDRPGVINHGVIDSLQEKLAIALKVHIDSKRAKPEKHLLYPKILACLTEMRT
MNEEYTKQVLQIQDIQPGNSFDPLILEVVSKDP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggagaacctcagcgactggcccccttcccagacctctacagaggaggaagag
gaggaggaagatgatggggagcccaaggtgtgtcaggtgtgtggagatcaggctacaggc
tatcacttcaacgccatgacatgtgagggctgcaagggattcttcaggcgtgccatgaag
caccccactaagttctgctgcccgcggcagggtgtctgtgtcatcaccaagaacaaccgc
cgccagtgccaggcctgtcgactccacaaatgccagtccataggcatgctgaaagagttg
ataatgtcaaaggaggctgtggagaagaggaggagtcagatcaggaggaacaggatggtt
gaagagcccccggtcctctcgccacaacaggaagctgtcatacaggaactgttcaacgcc
catgaaaagaccttcgacatcaccttttcccacttccagttcaggcccatcgacagagac
ctcaatcccatgtctgtgtggaaccagactgccagtggacaaagtgtaaaacagactaga
agaatggataacttgtcatcatcttactccacatccacctccaccagcttctcctcttcc
tcctgttctttagaggatgaggagaaggacaggagtgatggagggaagaatacggttttc
accactctgcccgatgtagctgaccttaccaccaacatggaggagaagaaggaggaggag
aagaaggaggacaggagtgatggggggaagaatacggttttcaccactctgccccacata
gctgacctcaccacctacatgatccaaaacatcatcaactttgccaaaggactcccctcc
ttcagggccctggccatagacgaccagatctctctgttgaagggggccatgtttgagatg
atgcagatccgcttcaacatgatgttcaatgtcaagacgggcatctgggagtgtggtccc
ctgacgtactgcatggacgacgctgtccgggctgggtttcagcgccacctgttggaccct
ctgatgcggttccactacaccctgaggaacctacagctgcaggaggtggagtatgttctc
atgcaggccatctccctcttctctccagatcgtccgggtgtgatcaatcatggtgtgatt
gatagtctgcaggagaagctggctattgcgctgaaggtccacatcgactccaagagggcc
aagcctgagaaacacctgctgtaccctaagattctggcgtgtctgacggagatgaggact
atgaatgaggagtataccaaacaggttctgcagattcaggacatccagccaggcaactca
tttgacccactcatcctggaggtggtcagcaaggacccctga
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