Oncorhynchus tshawytscha (Chinook salmon): 112241368
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Entry
112241368 CDS
T05605
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
otw04540
Gap junction
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112241368
04020 Calcium signaling pathway
112241368
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112241368
04540 Gap junction
112241368
09142 Cell motility
04810 Regulation of actin cytoskeleton
112241368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112241368
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112241368
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112241368
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Growth factors/receptors
112241368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
112241368
NCBI-ProteinID:
XP_042160611
LinkDB
All DBs
Position
LG02:complement(74815717..74827541)
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AA seq
243 aa
AA seq
DB search
MRAAFLSFLLACLLCLLRTAAEEDPLPPELLERLSRSEIRSISDLQRILELDLEENEVIG
ENKQRYHNKAFPHSYSQLKSSQTHSRHKRSIEEALPAVCKTRTVIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMHCLPSRKHHRTVKVAKVEYVRRRPKLKEVLVRLEEHLEC
ICTSKRHIKELYDTDNDPPLPPPPPSFTGPSRTKGKGRKRKKLKNLKEFLIPFSGMWKNM
SVY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcttttctgagcttcctcctcgcctgcttattgtgcctgttacgcaccgcc
gctgaggaggacccactccccccggagctgttggagcggctgtcccgcagtgagatccgc
agcatcagcgacctccagcggatcctggagctagacttggaagagaatgaggtgatcggg
gagaacaaacagaggtaccacaacaaggccttcccccacagctactcacagctgaagagc
tctcagacacactccaggcacaagaggagcatcgaggaggcgttacccgcggtgtgtaag
actcgtacggtgatctacgagatccctcggagccaggtggatcccacctccgctaacttc
atcatctggcccccctgtgtagaggtgaagagatgtaccggatgctgcaacaccagcaac
atgcactgcctgccttcccgcaagcaccatcgcactgtcaaggtggctaaggtggagtat
gtgaggaggcgtcctaaactgaaggaggtgctggtgcggctggaggagcaccttgagtgt
atatgcacctccaaacgacacatcaaggaactctacgatacagacaatgacccccctctt
ccccctcctcccccttcattcacaggacccagtaggaccaagggtaaagggaggaaacgg
aaaaagctcaaaaacctcaaagaatttctcatacctttctcaggcatgtggaaaaacatg
agtgtttattag
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