Oncorhynchus tshawytscha (Chinook salmon): 112242814
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Entry
112242814 CDS
T05605
Symbol
tlr7
Name
(RefSeq) toll-like receptor 7
KO
K05404
toll-like receptor 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112242814 (tlr7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112242814 (tlr7)
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
112242814 (tlr7)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRRNT
Motif
Other DBs
NCBI-GeneID:
112242814
NCBI-ProteinID:
XP_024266438
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All DBs
Position
LG03:complement(72604977..72611820)
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AA seq
1059 aa
AA seq
DB search
MMRSECASFHVCGVILLGLWCSSVLEAGSWYPKTLPCDVTLASNNTMVNVDCTERGLLEV
PKDIPRNTTNLTLTINHIPHINSTSFQGLENLTEIDMRCNCVPIKIGPKDRMCTESVTIK
TNTFKDLRNLKALYLDGNQLSSIPKGLPPNLILLSLEVNKIYTILKRNLSDITNVQILYL
GQNCYYRNPCNVSYQIEEGAFLQLGNMTLLSLKSNNLSYIPPRLPTSLRELYLYNNKIEM
VTDKDFHNLTQLEILDLSGNCPRCYNAPFPCIPCPNNSLQIDKNTFKTLTKLRILRLHSN
SLTYVLREWFQNCKELRVLDLSTNFLAREIAFTYFPRALPNLEELDLSFNYELQRYPATL
HLSSSFSSLKSLKVLRIRAFVFQQLTLEDISPLIHLKNLEVIDLGTNFIKITNLSILMEL
KSFKIINLSDNKISSPSESGQSVAFSGGEAIHGSPMSDSGHNSNGEVREIHYFRYDEYAR
SCKYKDKEDGTLNSFVNTQCSKFGKTLDISRNNIFFLHSRFLNLADLRCLNLSGNAMSQS
LNGSEFTFLTNLQYLDFSFNRLDLLYSTAFQELRSLVILDISNNNHYFESEGLTHMLNFT
KNLTNLTRLLMNYNKISTSTNTELESLSLEELEFKGNRLDMLWRDGDTRYIDYFKKLLNL
RVLDISHNNLNFIPQQVFQGLPDKLTHLYINNNRLKIFSWEKLIILQHLEVLDLSSNSIS
TVPPELSNCTKSLKTLLLRKNQISKLSAYFLKDAFSLKNLDLSFNNIQNIEQTSIPDDVV
DQMDTLVLNNNKFMCNCNALMFVMWLNRTMVNIPRLATAVTCAAPGAQRGHPVISLDLEL
QACQHNYLSIILYILLTSLVLSFIALSISSHLFLWDVWYLYHFLLAKFKGYRRLSSPSTA
YDAFVVYDKKDPEVSEWVLKELLVQLEDQGDHPLQLCLEERDWIPGCPLIDNLSQSIHQS
KRTVFILTNKYIKSGDFKTAFYMAHQRLMDERDDVIVLIFLEKVPSHSKYLRLRKRLYRR
SVMEWPTNPQAQQYFWFSLRSVLVTDSQKQYSNLFKETL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggtcagaatgtgcatctttccacgtgtgtggggtgatactgctgggcctgtgg
tgctcctctgtgctggaagctggaagctggtaccccaaaaccctaccctgtgacgtcacc
ctggccagcaacaacaccatggtcaacgtagattgcactgagagaggacttctagaggtc
ccaaaggacatccccagaaacaccaccaacctgaccctcaccatcaaccacatccctcac
attaactcaacgtccttccagggcctggagaacctcaccgagatcgacatgcgctgtaac
tgcgtgcccatcaagatcggccccaaggaccgcatgtgcacagagagtgtgactatcaag
acgaacaccttcaaagacctcaggaatctgaaggctctgtatttggatgggaatcagctt
tccagcatcccaaagggtctccctccgaacctcattctgctcagtctagaggtgaataaa
atatataccattctgaaaaggaacctctctgacatcactaacgtacagattctttacctg
ggtcaaaattgttactatcgtaacccatgtaatgtttcctatcaaattgaggagggagca
tttttacagcttggtaacatgactctcctatccctcaagtcaaataacttatcctacatt
cccccaagattaccgacaagtctcagagagttgtatctctataataacaagattgaaatg
gtaactgacaaagattttcataacctaacccaattggagatacttgacctgagcggaaac
tgcccacgctgttacaatgcaccgtttccttgtattccgtgtcctaacaattcccttcag
atagacaaaaacacctttaaaacattgaccaaactgaggatactacgcctgcatagtaac
tccctcacgtatgtgcttagagaatggtttcagaactgtaaagagctgcgagtacttgat
ctctcaaccaactttttagctcgagagatagcatttacttacttcccacgagctctaccc
aacctggaagaactggacctgtcttttaactatgagctgcagaggtatccagctacactg
caccttagttcctcattttcctccctgaaatccttgaaagtactccgcatcagggccttc
gtcttccagcaactcaccctcgaagacatcagcccactgattcatctaaagaacctggag
gtcattgacttgggcaccaacttcatcaaaataaccaacctcagcattctaatggaactg
aaaagcttcaaaataataaatttatctgacaacaaaatatcatccccctctgaaagtggt
cagtctgttgccttttcaggaggagaagccatacatggctccccaatgtcagattctggg
cataacagcaatggagaagtgagagagattcattattttagatacgatgagtacgctcgc
agctgcaaatacaaggacaaggaggatgggacgctgaattcattcgtcaatacccagtgc
agcaagtttggaaaaaccctggatatcagcaggaataatatatttttccttcactccaga
ttcttgaaccttgctgaccttagatgcctaaatctctctggaaatgcaatgagccaaagt
ctaaatggttctgagtttactttcctcactaacttacagtatcttgacttctcattcaat
cgtctggaccttctctattccacagcgtttcaggaactgagaagtttagttatcttagac
ataagcaacaacaatcattactttgaatcagagggtttgacccacatgcttaatttcaca
aaaaatttgaccaatctgacgagattactaatgaactataataagatttctacatccacc
aacacagagctggagagtctctctctggaggagttagagttcaaaggtaaccgtttagat
atgctttggagagatggtgatacaagatacatcgactacttcaaaaaactgctaaatctg
agggtcctagacatctctcacaacaacctcaacttcatccctcagcaagtcttccaaggc
ctgccagacaaactcactcatctctacatcaacaacaacagattgaagatatttagttgg
gagaagctcattattcttcagcacttagaggtcttagatctcagtagtaatagcatatca
acagttcccccagagctctccaactgcaccaaatctctcaagactctcctcttacgcaaa
aatcaaatatccaaactctctgcgtatttcctcaaggacgcctttagtttgaagaatctg
gatctcagcttcaataacattcaaaacattgagcagaccagcatccctgatgatgttgtc
gatcaaatggacacgttagtcctgaacaacaacaagtttatgtgcaactgtaacgccctc
atgtttgtgatgtggctgaaccgcaccatggtgaacatccccagactggccaccgctgtg
acctgtgctgctccaggagcccagaggggtcatccggtcatctccctggacctagaactg
caggcctgccagcacaactacctatccatcatcctttacatcctactcacatccctggtg
ctcagcttcatcgccctctccatctccagccacctcttcctctgggacgtgtggtacctc
taccacttcctcctggccaagttcaaaggctacagacgcctgtcctcgccgagcactgcc
tacgacgccttcgtggtatacgacaagaaggacccggaggtatctgagtgggtgctgaag
gagctgcttgttcagctggaggaccaaggggaccaccccttacagctgtgtctggaggaa
cgagactggatccctggctgccccctgatcgacaacctgtctcagagcattcaccagagc
aagaggaccgtgttcatactgacgaacaagtacatcaagagcggggacttcaagactgca
ttctacatggcccatcagcgacttatggatgagagagatgatgtgattgtcttgattttc
ctggaaaaagtccccagtcactcaaaatacctgagactcaggaagaggttgtataggcgg
tcagtgatggagtggccaacaaatcctcaagcgcagcaatacttttggtttagcctaagg
agtgtactggtaacagacagtcaaaaacaatacagtaatctcttcaaggagactctttga
DBGET
integrated database retrieval system
