KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112243905
Entry
112243905         CDS       T05605                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain
  KO
K06752  MHC class II antigen
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145  Phagosome
otw04514  Cell adhesion molecules
otw04672  Intestinal immune network for IgA production
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    112243905
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112243905
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    112243905
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112243905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112243905
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112243905
  Exosomal proteins of epithelial cells
   112243905
  Exosomal proteins of breast milk
   112243905
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 C2-set_3
Other DBs
NCBI-GeneID: 112243905
NCBI-ProteinID: XP_042174021
UniProt: A0A8C8FTY7
LinkDB
Position
Unknown
AA seq 242 aa
MNLSVAIVVLTAVVCTSAEIPHETVYVQGCLEKTKVEAEAELQVDGEEVVYADFQSGQEV
WTLPEFLGPFPSSTVRNFYKNAVKGRRLCQDALALWILEEKFPPEVKDAPESTIYPRAEE
VLGVENTLICFANHFYPPPVNVNWTKNGLEVTEGVSLSRYYPNKDGTFHQFSSLSFTPQE
GDVYACTVEHTALEDPKTRFWEIHEVSGSSAGPAVFCGVGLTLGLLGVATGTFLYVKGQQ
FN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaacctctctgtggctattgtcgttcttactgcggtcgtctgcacttcggcagaaatt
cctcatgagaccgtctatgtgcagggctgtcttgagaagacaaaggtggaggcggaggca
gagcttcaggtggatggggaggaagtggtatatgctgacttccagagtggacaggaagtt
tggacattgcctgagttcctggggccattcccaagctccactgttcgtaacttctacaag
aatgccgttaaaggcagacgattgtgtcaggatgccttggctctttggatattagaagaa
aagtttccacctgaggtaaaagatgcccctgagagcaccatctaccccagggctgaggag
gtgctgggggtggagaacacccttatctgctttgccaatcatttctaccccccgcctgtc
aatgtcaactggaccaagaatggcctggaggtgactgagggagtgtctctcagtcggtac
tatcctaataaagatggaacgttccaccagttctccagcctgagtttcactccacaggag
ggggatgtctatgcctgcactgtggagcacacagccttggaggaccccaaaaccaggttc
tgggagatacatgaggtgagtgggtccagtgctggtcctgctgtattctgtggagtgggc
ctgactctgggactgttgggagtggctaccggaacattcctgtacgtcaaaggacaacag
tttaactga

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