Oncorhynchus tshawytscha (Chinook salmon): 112244620
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Entry
112244620 CDS
T05605
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04145
Phagosome
otw04218
Cellular senescence
otw04514
Cell adhesion molecules
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112244620
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112244620
04145 Phagosome
112244620
09143 Cell growth and death
04218 Cellular senescence
112244620
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112244620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112244620
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112244620
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112244620
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Antigens
112244620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_I
MHC_I_3
Motif
Other DBs
NCBI-GeneID:
112244620
NCBI-ProteinID:
XP_024268118
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Position
LG28:complement(30510743..30516992)
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AA seq
412 aa
AA seq
DB search
MMNPIQYVFIGLLLCSFISQNDVGPTVKHVLEYMYTRFNSSHFEVAGLLDGELVDFYSSA
LKSPVPKKSWNEENTSFGYNDWQEILSARQEVNTYFLSSAVDLRRHFVKHPLSGDIVQMK
LGCTVDITIIESKKTEKVVGFAEFAYDGNTVLFLSDNSSIWIPKDEYAHDIHDIVHKWNT
QSMKDHLTNFVNVDCPVALDRFRLLERTNSSAPKVYTVPGGSLKPGLINLTCLITGSYPK
SSPIEMNLFRDNILLTEMEGVHSSGVRPNEDHTYQLRKTVRIDTSESVVYRCDVNHKSFP
KPRNYTWEVKKQEGSNIQIYIGLCIVLLFLLFFKNRCRSEPNKHLAANPGENAALGVQDG
GSLIDQGGDATSVDLSTEREVLSNAPDDEGENDEAYGSCGSSDSDLSQIQIT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccctatccaatatgtatttattggactgcttctttgttcgtttatttcgcaa
aatgatgtaggacctacggtcaaacatgtacttgagtacatgtacacacgcttcaattcc
tcccactttgaagtcgctgggttgttggatggagaactggtggacttctacagcagtgcc
ctcaagtcccctgtacccaaaaaaagctggaatgaagaaaatacaagctttggatataat
gactggcaagaaattctttcagctcgacaggaagttaatacgtactttttatccagtgct
gtagacctgaggaggcactttgtaaaacatcccttaagtggggatattgtgcagatgaaa
cttggttgtactgtggatataaccatcattgaaagcaaaaaaacagagaaagtcgttggc
tttgctgagtttgcctatgatggaaacacagtgctgttcctcagtgataactcaagtata
tggatcccaaaagatgaatatgctcatgatattcatgatatcgtacacaaatggaacacg
caaagcatgaaagaccacttaaccaactttgtgaatgtggactgtccagtggcacttgat
cgtttccgattattagagcgcacaaactcatctgctccaaaggtctacactgtccctggt
ggctctttgaaacctgggttgatcaacctgacttgtttaattaccggatcctatccaaag
tcgtcacccattgagatgaacctgtttagggacaacatcctcctaacagagatggagggt
gtccattcatcaggagtcagacctaacgaagaccacacctaccagctgaggaagacggtg
aggatcgacacctccgagtctgtcgtttatcgatgtgatgtcaatcataaaagcttccct
aaaccccggaattacacttgggaggtgaaaaaacaagagggatcaaatattcaaatttac
attggactatgcatagtgttgcttttcctactgtttttcaaaaacagatgtagatctgag
cctaataaacatttggctgctaatcctggagagaatgctgccctgggagttcaagatgga
gggagtttgattgatcaaggaggtgatgccacttctgtcgatctgtccactgagagagaa
gttctttcaaatgcacccgatgatgaaggtgaaaacgatgaagcctatggaagttgtgga
agctctgattcagacctgtcacagattcaaataacctaa
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integrated database retrieval system
