Oncorhynchus tshawytscha (Chinook salmon): 112244981
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Entry
112244981 CDS
T05605
Name
(RefSeq) vitamin D3 receptor A isoform X1
KO
K08539
vitamin D3 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112244981
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112244981
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112244981
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112244981
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112244981
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
112244981
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
112244981
NCBI-ProteinID:
XP_024268666
UniProt:
A0AAZ3Q8P0
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Position
LG16:complement(64737134..64823417)
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AA seq
434 aa
AA seq
DB search
MDPQTPLSRSVMETMAVSTSVVGPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFR
RSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQK
RKEEEAAREALRPRLNDEQSQVIASLVEAHHKTYDDSYSDFSRFRPPVREGPVTRSASRA
ASLHSLSDASSDSFNHSPESVDTKLMNFSSLLMMYQDSAGSPDSSEDDGSKLSMLPHLAD
LVSYSIQKVIGFAKMIPGFRGLTAEDQIALLKSSAIEIIMLRSNQSFNLEDMSWSCGGGP
DFKYCVNDVTKAGHTLDLLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVLDHAK
IEVLQDRLSEVLQAYIRVNHPGGRLLYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQ
LTPLVLEVFGSEVS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggatccacagacccctctgagtcgctcagtgatggagaccatggctgtgagcacgtct
gtggtggggcctgatgagtttgaccgcaacgcgccgcggatctgtggcgtctgtggagac
aaggccacaggcttccacttcaacgccatgacctgtgagggctgcaaaggcttcttcaga
cgcagcatgaagcgtaaggccagtttcacctgccccttcaacggcagctgcaccatcacc
aaggacaaccggcgacactgccaggcctgccggctcaaacgctgcgtggacatcggcatg
atgaaggagttcatcctgacagatgaggaggtgcagaggaagaaggacctgatccagaag
aggaaggaggaagaggcggcgcgggaggccttgagacctaggctgaacgacgagcagagc
caggtcatcgcctcattggtggaggcccaccacaagacctatgatgactcctactctgac
ttctcacgcttcaggcccccagtgcgagagggcccagtaacacgcagtgccagtcgtgca
gcctcccttcactctctgtcagatgcctcctcagactccttcaaccactcaccagagtct
gtggacaccaagctgatgaacttcagcagtctgttgatgatgtaccaggatagtgcaggc
agcccagactccagtgaggacgatggctccaagctctctatgctgccccacctggctgac
ctggtcagctacagcatccagaaggtcatcggcttcgctaagatgattcctggcttcaga
gggctgactgctgaggaccagatcgccctgctgaaatccagtgccatcgagatcatcatg
ctgcgttccaaccagtccttcaacctagaggacatgtcctggagctgtggtggtggtcct
gacttcaagtactgcgtcaacgacgtcaccaaggcgggtcacactctggacctgttggag
ccactggtgaagttccaggtgggcctgaagaaactcaagctccatgaggaggaacacgtg
ctgctcatggccatctgcctgctgtctccagatcgacctggggtgctggatcacgctaag
atcgaggttctccaggaccgtctgtcggaggtgctccaggcctacatcagagtgaaccac
ccaggaggacggctgctctacgccaggatgatccagaagctggccgacctgcgcagcctc
aacgaggagcactccaagcagtaccgctcgctgtccttccagccagagcacagcatgcag
ctcaccccgctggtgctggaggtgtttgggagcgaggtgtcatag
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