Oncorhynchus tshawytscha (Chinook salmon): 112245978
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Entry
112245978 CDS
T05605
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00514
Other types of O-glycan biosynthesis
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112245978
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112245978
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112245978
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
112245978
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112245978
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
112245978
NCBI-ProteinID:
XP_042163277
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Position
LG27:9854605..9862660
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AA seq
380 aa
AA seq
DB search
MSKSYGKKTIVSITSGLFTCLMVLLVVAQHQRVQVDEVPNQREMGTRSLQSMDTLATDGV
KAVQQQVNSEAQTKKGFSAYFSKLTRGRREADKPAGSAQSATNASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGDDEELKKKVGSHVINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNMRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttatggtaagaaaacgattgtttctataaccagtggactattcacctgt
cttatggtgctcttggtagtcgcgcagcatcaaagagttcaggtagatgaggttccaaac
cagagagagatggggacgcgctcactccagagcatggacaccttggctacggacggagtg
aaggctgttcagcaacaggtcaactcggaggcgcagacgaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacaaatgcgtcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagacggagacgatgaggagctgaagaagaaagtt
gggagtcacgtcatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttttgtcatgtg
gatgatgataactacgttaacatgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgagaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcattgagtcg
gtgctgggggtgcctctgacccgcagtaacttcttccactcccatctggagaacctgcaa
caggtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttccctgtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgtccgcttcaggttgcctac
tag
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integrated database retrieval system
