Oncorhynchus tshawytscha (Chinook salmon): 112246240
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Entry
112246240 CDS
T05605
Name
(RefSeq) vitamin D3 receptor B-like isoform X1
KO
K08539
vitamin D3 receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112246240
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112246240
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112246240
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112246240
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112246240
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
112246240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112246240
NCBI-ProteinID:
XP_042180703
UniProt:
A0AAZ3QYC1
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Position
LG07:60955455..61057358
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AA seq
473 aa
AA seq
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MVKRVVKSLSSIYKQRHAKISGFQRGSSLETEMTIAKWNEMVMENTAVSTSTLANEEFDR
NVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQA
CRLKRCVDIGMMKEFILTDEEVQRKKDLIQRRKDEEAQREAQREAQRPRLSEDQSQVIAT
LVEAHHKTYDDSYSDFNRFRPPVREGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKL
MNFSNLLMMYKDHGGSPDSNDDDGSKLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTPE
DQIALLKSSAIEVIMLRSNQSFNLEDMSWSCGGPDFKYCVTDVTKAGHTLELLEPLVKFQ
VGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHGRIEALQDRLSETLQAYIRLHHPGGRLV
YARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEFTRVSPI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggttaagagagttgtcaagtctttatcctccatctacaaacaacggcatgccaaaatc
tcaggttttcaacggggttcaagtctggagactgagatgacaattgcaaaatggaatgaa
atggtgatggaaaatacggctgtgagtacctccactctggccaatgaggagtttgacaga
aacgtaccgcggatctgcggtgtgtgtggggacaaggccaccggtttccacttcaatgcc
atgacctgcgagggctgcaagggtttcttcagacgcagtatgaagcgtaaggctagcttc
acatgccctttcaacggcagttgcaccatcaccaaggacaaccgccgccactgccaggcc
tgccggctcaaacgctgcgtggacatcggaatgatgaaggagttcattctgacagatgag
gaggtgcagcggaagaaagatctgatccaacggaggaaggatgaggaggcgcagcgggag
gcgcagagggaggcgcagcgaccccggctgagcgaggaccagagccaggtcatcgccaca
ctggtggaggcacaccacaagacctacgacgactcctactccgacttcaaccgcttcagg
cctccggtccgtgaaggcccagtgacacgcagtgcaagcagagctgcttctctccactct
ctgtctgatgcctcatctgactccttcagccactctccagagtctgtggacactaagctg
atgaacttcagtaacctgctgatgatgtacaaggaccacggtggcagcccggactctaac
gacgatgacggctccaagctctccatgttgccccacctggccgacctggtcagctacagc
atccagaaggtcattggtttcgctaagatgatccccggtttcagggagctgacgcctgag
gaccagatcgccctgctcaagtcaagcgccatcgaggtgatcatgctgcgctcaaaccag
tccttcaacctggaggatatgtcctggagctgtggtgggcccgacttcaagtactgcgtc
accgacgtcactaaagcgggccacactctggagctgctggagcccctggttaaattccag
gtgggccttaagaaactcaacctccatgaggaggaacatgtgctactcatggccatctgc
ctcctctccccagaccgtcctggcgtgcaggaccacgggcgcatcgaggcactgcaggac
cgtctgtcggagacgctgcaggcctacattcggctgcaccacccgggcggccgcctggtg
tacgctaggatgatccagaagctggcggacctgcgcagcctgaacgaggagcactccaag
cagtaccgctcgctgtccttccagccagagcacagcatgcagctcaccccgctggtgctg
gaggtgttcggcagcgagttcactcgcgtttcgcccatctga
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