Oncorhynchus tshawytscha (Chinook salmon): 112247269
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Entry
112247269 CDS
T05605
Name
(RefSeq) ras GTPase-activating protein 1 isoform X1
KO
K04352
Ras GTPase-activating protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112247269
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112247269
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Gene cluster
GFIT
Motif
Pfam:
SH2
RasGAP
PH
C2
SH3_1
SH3_9
SH2_2
PH_11
PH_RASGAP
Motif
Other DBs
NCBI-GeneID:
112247269
NCBI-ProteinID:
XP_024271747
UniProt:
A0A8C8LNY3
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Position
LG04:15885777..15935105
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AA seq
1080 aa
AA seq
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MIAAEVSSEDTGSVSTGVAGGGGPETAHFPFYPNQTRVRVTDFGQRSAPNSRYQSNTSPD
ALPDMSMIYPVSGGDITGPVLSATGNGGGGHAICQGTSSGTIGGVCYSPTSEGPGSRISP
TSAGPDGPSVFPPLPPPPLLPTGYGGLSTVDESEMQDGPEYEEEEVVFPLSAPPTNQWYH
GKLDRTIAEERLRQAKTPGSYLIRESDRRPGSFVLSFLSLTSVVNHFRIIAMCGDYYIGG
RRFSSLSDLIGYYSYVSCLLKGEKLLSPVAPPEPVEDRRRVRAILPYTKVPETDEISFLK
GDMFIVHNELDDGWMWVTNVRTEEQGLIVEDLVEEVGREEDPHEGKVWYHGKISKQEAYN
LLMTVGQVCSFLVRPSDNTPGDYSLFFRTNENIQRFKICPTPNNQYMMGGRYYNSVDDIV
DHYKKEQIVEGYNLKDAVSVQHQEQVLSDLVDGKEIYNTIRRKTKDAFYKNIVKKGYLLF
NKGKGKRWKNLYFILEGNDAQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQ
VVVQHFSEEQYIFYFAGETPEQAQDWMKCLHTFCSNLRKPTQPTPNKRLRQVSSLVLYVE
EAHKLPVKHFTNPYCNIYLNNVQVAKTHPREGQNPVFTEEFIFDDLSSEINRFEISLSNK
TKKSKESDILFMRCQLSRLQKGQMIDEWFPLSSHVPLKGIEPGSLRVRARYSMEKIMPEE
EYSEFKELILLKEFHVIYALAHVCGQDRTLLASILLRIFRHEKTEAPLLRTLNDREINME
DEATTLFRATTLASTLMEQYMKATATPFVHHALKDTILKIMESKQSCELNPSKLEKNEDV
HLNLAHLLLILSELVEKIFMAAEILPPVNRLSSVIDDEVPIDDGCQSLSTPDDIVHRPNP
NKTLRYIYGCLQKSVQQKWPNTTMRTRVVSGFVFLRLICPAILNPRMFNIITDPPSATAG
RTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKNNKHRMIMFLDELGNVPDLPEATEHF
RTDLSRDLAALHEICVSHSDDLRTLSNERGAQQHVLKKLLAITELLQQKQDHYAMSNSNR
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgatagctgcggaggtcagtagtgaggacacgggctctgtctcgacaggggtggcgggc
ggcggaggccccgagacggcccattttccgttttatcccaatcagaccagagtgcgggtc
actgattttggccagcgatcagcaccaaactcccgctaccagtcgaacacctccccggac
gccctccctgatatgagtatgatttaccccgtatctggaggagatattaccggaccagtc
ttgtccgctacagggaatggtggtggtggacacgcaatttgtcaaggaacaagctcaggg
accattggcggtgtgtgctactcccccacctcagaggggcccggcagccggatatcaccc
acctcggcgggtccagacgggcccagtgtcttccccccactaccaccaccacctctgctg
cccacaggctacggaggactcagcactgtggatgaaagcgagatgcaggatggaccagaa
tacgaggaagaggaggtggtcttcccgctctcagcgccgcccactaaccagtggtaccat
gggaagctggaccggaccattgctgaggagcggttgcggcaggccaagactcctggcagc
tacctcatcagggagagtgaccgccggcccggctcctttgtcctgtccttcctcagcttg
accagcgtggtcaaccatttcaggataatcgccatgtgtggagactattacattggcggg
cgccggttctcgtccctgtcagacctgattggttattacagctatgtgtcttgcctgctg
aaaggtgaaaagctgctatcacccgtggctcctccagagcctgtagaggacaggaggcga
gtgagagccattcttccatacaccaaagtgccagagaccgatgagatcagcttcctgaaa
ggggacatgtttatcgttcacaatgaactggatgacggctggatgtgggtgaccaacgtg
aggacagaggagcagggcctcattgtagaggatctagtggaggaggtgggacgggaggag
gacccacatgagggcaaagtctggtatcacggcaagatcagcaaacaggaggcctataac
cttctgatgacagttggtcaagtgtgcagcttcctggtccggccgtcagacaacacaccc
ggggattactcactgttttttcgcactaatgagaacatccaaaggtttaagatatgcccc
acccccaacaatcagtacatgatgggggggaggtactataacagtgttgatgacattgtg
gaccattataagaaggagcagattgtagagggctacaacctgaaagatgctgtttcagtg
cagcaccaggaacaagtgctctcagatttggtggacggcaaggagatctataacactatc
agacggaaaacgaaagatgcgttctacaaaaacattgtcaagaaaggctacctcctattc
aacaaaggcaaaggtaagcggtggaagaacctctacttcatcctggaggggaacgacgcc
cagctcatctactttgagagtgagaagagagccaccaaacccaaaggtctgattgacctg
agtgtgtgttccgtgtacggtgtgcacgacagtctgtttggcagaccaaactgtttccaa
gttgtggtccagcactttagcgaggaacagtacatattctacttcgctggcgagactcct
gaacaggcacaggactggatgaaatgtctgcacacgttctgcagtaaccttaggaaaccc
acccagcccactcccaacaagaggctccgacaggtgagcagcctggtcctttatgtggag
gaggcccacaagctgcctgtgaagcacttcaccaacccctactgcaacatctacctgaac
aatgtgcaggtggccaagacccacccccgagagggccagaaccccgtcttcacagaagag
ttcatctttgatgacttgtcaagtgaaatcaacaggtttgaaatcagcctgagcaataag
acaaagaagagcaaagaaagtgacatcttgttcatgcgttgccagctgagccgcctacag
aagggccagatgatagacgagtggttccctctgagctcccacgtgcctctgaagggcatc
gagccaggctctctgagagtccgagcccgctactccatggagaaaatcatgcctgaggag
gagtatagcgagttcaaagagctgatcctgctgaaggagttccatgtgatctatgctctg
gcccatgtgtgtgggcaggaccgtaccctgctggccagcatcctgctgcgcatcttcaga
cacgagaagacagaggcccccttactcaggacactcaacgaccgagagatcaacatggag
gacgaggcgacaaccctgttccgagcgaccactctggccagcacgctgatggagcagtac
atgaaggccacggccacaccctttgtccaccacgccctcaaagatacaatcctcaagatc
atggagagcaagcagtcctgcgagctgaacccctccaaactggagaagaacgaggatgta
catctgaacctggcccacctcctcctaatcctgtctgagctggtggagaagatcttcatg
gctgctgagatcctgccccctgtaaataggctttcatctgtcatcgacgatgaagtccct
atcgatgatggctgtcaatcattgtcgacacccgatgacatcgttcatcggcccaaccct
aataaaactctacgatatatctatgggtgtctacagaagtcagtgcagcagaaatggccc
aacaccactatgagaacccgggtggtcagtggctttgtgttcctgagactgatctgtcct
gccatcctcaacccaagaatgttcaacatcatcactgaccctccctctgcaacagcggga
cgtaccctcactctggttgccaagtctgtccagaacctggctaacctggtggagtttggt
gctaaggagccctacatggagggagtgaaccccttcatcaaaaacaacaaacataggatg
atcatgtttttggatgagttgggtaatgtccctgacctccctgaagctacagagcacttt
aggacagacctgtcccgtgaccttgctgccctgcatgagatctgtgtctcgcactcagac
gacctccgcaccttgagcaacgagaggggagcacagcagcatgtgctgaaaaagctgctg
gccatcactgagctccttcagcagaaacaagatcactatgccatgtccaacagcaacagg
tag
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