KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112247612
Entry
112247612         CDS       T05605                                 
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
  KO
K03158  tumor necrosis factor receptor superfamily member 1A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010  MAPK signaling pathway
otw04060  Cytokine-cytokine receptor interaction
otw04150  mTOR signaling pathway
otw04210  Apoptosis
otw04217  Necroptosis
otw04920  Adipocytokine signaling pathway
otw05132  Salmonella infection
otw05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    112247612
   04150 mTOR signaling pathway
    112247612
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    112247612
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    112247612
   04217 Necroptosis
    112247612
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    112247612
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112247612
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112247612
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:otw04050]
    112247612
   04090 CD molecules [BR:otw04090]
    112247612
Cytokine receptors [BR:otw04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   112247612
CD molecules [BR:otw04090]
 Proteins
  112247612
SSDB
Motif
Pfam: TNFR_c6 Death BatA Phage_holin_3_6
Other DBs
NCBI-GeneID: 112247612
NCBI-ProteinID: XP_024272188
LinkDB
Position
LG23:complement(24713473..24728091)
AA seq 405 aa
MDVLRWKWKEKCILNVCALLILCWSVDPSPSAPPLPTTQEFQCLEGSHYHTANGTCCRKC
HEGFKLKEDCTKNGDNSLCVSCEEGRTYREKSNYANTCLRCTLCVDNEEVFSKCKKSKNT
VCRCKKGFYQNRINSGTRECLTCKTCGPGERATQLCKEESDTVCECKDFYFRDKKSNKTC
LSCKICELTADCQQECSSGTHPTPNDDGKSEDTGWGVWYPYLLAAFGCVCVLLLVVVGIM
GVLVVRRKPKRSNSFPSAEITSQVSETSTRRLIQEDPENVLNQCIPSCSPVCECEQELLS
KLPDCVPKEIKISELIYSVLDQVPPRHMKELVRSLGVSDIVIERAENDHLRDTKEAQYQM
LRVWAKGSAQGGVLARPLLYHLLDKLKDMDLGRTAEELETKYGDQ
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggacgtcttgagatggaaatggaaggaaaaatgcattctgaacgtttgcgctctgctc
atattgtgctggtcagtagacccctccccctcagcaccaccacttcctacaacccaggag
tttcaatgtcttgaggggagtcattaccacactgctaacgggacatgctgtcgaaagtgc
catgaagggtttaagctgaaggaggactgcactaagaacggcgacaatagcctatgtgtc
tcctgtgaagagggcaggacgtaccgagagaagagtaactatgccaacacctgcctccgt
tgtacactctgtgttgacaatgaggaagtgttttcaaaatgcaagaagagtaagaacaca
gtgtgtcgctgcaaaaaaggcttctaccaaaacagaataaactcgggaacacgggagtgc
ctcacttgcaagacatgtggacctggagagagagcaacgcaactatgtaaggaagagagt
gacaccgtgtgtgaatgtaaggacttctacttccgagacaagaaaagcaacaagacctgt
ctttcatgcaaaatttgtgagctgactgctgactgccagcaggagtgttcttcaggcaca
catcccactcccaatgacgatggcaaatccgaagatactggatggggtgtttggtatccc
tacctgttggctgcgttcggctgtgtttgtgtgttattactggtggttgtggggatcatg
ggcgtactagtggtccgacggaagcccaagaggtctaactcctttccctctgctgagatc
acctctcaggtctctgagacgtctactcggaggctgatccaagaggacccagagaatgtt
ctcaaccagtgtatcccttcatgtagcccagtgtgtgagtgtgaacaggagctcctcagc
aagctaccagactgtgtccccaaggagatcaagatctctgagttgatctactcggtgttg
gaccaagtccccccgcgccatatgaaggagctggtgcgttcgctgggtgtgagtgacatc
gttatagagagggctgagaatgaccacctccgtgacactaaggaagcccagtaccagatg
ctgagggtctgggctaagggaagtgctcagggaggggtgctagcacgccctctactgtac
cacctgctggataagctgaaagacatggacctgggacggactgcagaggagctggagacc
aagtatggagatcagtag

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