Oncorhynchus tshawytscha (Chinook salmon): 112248632
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Entry
112248632 CDS
T05605
Name
(RefSeq) ankyrin repeat and LEM domain-containing protein 2
KO
K21412
ankyrin repeat and LEM domain-containing protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112248632
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112248632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_5
LEM
Ank_2
Ank
Ank_3
Cauli_VI
Ank_4
Motif
Other DBs
NCBI-GeneID:
112248632
NCBI-ProteinID:
XP_024273578
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All DBs
Position
LG04:35649045..35661517
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AA seq
1003 aa
AA seq
DB search
MEAVLRGLRGLSADELREEFTRADLKCGPITATTRAIFERKLARVLTEAEGSSSATDSSS
NATTTGPGSSAKAASAAGQAKPVPSCATTSTPTGTDSLKVVSDEVDFGYGMGLNPPEEEE
LGLTVKSRTPCNIGVEDPGSQSKAETPSKTAQMSPMFFYGVCPLWDDVLSTNERSHVYGD
KKEALQAVKMMKGARFKAFSNREDAEKFAKGISDYYPSPSKFAPCVSPVVPGLVFCKDNV
PVVEVDAINRERANSFKSPRCQDLTAKLRKAVEKGDVVAFSELVWSNPRYLIGSGDNPTV
VQEGCRYNVMHVAAKENEPGIAQLLLETLENPDFMRLMYPDDLEAMMQKRIRYIVDLYLN
TPDKAGFETPLHFACKFGCPEVVNVLCSHPDTDKNCKNKYDQKPSDVICERKNKTQEVKQ
KICDYLEDRCYIRLLRAIDNSSQPVIDAPWSPEPSETLPRSLAPRLTRSPMDPVMAVRAF
AGPLSPSKADEFRRVWKTPPRDRAGYFQHILKSDPDRGAERVGRDLARELGHPWAEYWDF
LDSFTDLSSADGLRKLEEYLNKKDFSQRAHEEAGENVTSNRFRTPSPGKPKKFCNSISVG
AFLDEGDDVSLEEIKNRQNAALTSFSSACSKDSMAGAVGGLALHEFHILPVSHHGADDLI
ETAAERDLLCSSVSESLLSPVCNNGLCPSTGAERTHNGDKGSPRTSSSPSHLLSPISNLM
VEFERMSLQDGLDSFTRERRSSGGHREGLSRGELAAGVGRLTLGGNSNEDYLFERGCSLE
PGDRERRVREGEVEDRASGGSGSSEEYFTAEESLEALGQRTSGPGTVSGRTLCSRSKSWD
HGGRDLSSSGSSSSYTSLDNSHEFIARTPPRFRRGLFIEGDSPTKLDREVLSAIEVIDID
PSKFPSIQKWKNTMQTYTSSDMQSWPSPVAVKSSARVHRASPLTHGSPVSSLLSPAGGRF
SPARHTGSPDFTSCYSPAHASYTQRIRLRHINDTPPLPPGQKR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggttctgagagggctgagagggctgagtgcagatgagctgcgagaggagttc
accagggccgacctcaagtgcggcccaatcacggccaccactcgcgccatcttcgagagg
aagttggcccgcgtcttgacagaagccgagggcagcagcagcgccacggacagtagcagt
aatgccaccaccacaggcccaggcagcagtgcaaaggccgccagtgcagcagggcaggcc
aaaccggtgccatcatgtgccacaacatcaacacccactggcactgactctcttaaggtt
gtcagtgatgaggtggattttggttacggaatggggctcaatcccccagaggaagaggaa
cttggcctgacagtaaagtcaaggaccccttgtaatatcggtgtggaagaccctggctct
cagtctaaagcagagactccttcaaagacagcacaaatgtcaccaatgttcttctatgga
gtgtgtccgttgtgggatgatgtcttgtctacaaatgagaggtcccatgtgtatggagat
aagaaggaggctcttcaggctgtgaagatgatgaaaggagctcgctttaaagccttctcc
aatcgagaggatgctgagaaatttgccaaagggatcagtgactactacccctctcccagt
aaatttgccccctgtgtctcccctgtcgtaccaggcctggtcttctgcaaggacaacgtc
cctgttgtggaggtagacgccatcaacagggagagggccaacagcttcaaaagccctcgc
tgccaggacctgacagccaaactgaggaaagctgtggagaagggggatgtggtggccttc
agtgagctggtctggagcaacccacgctatctcattggctctggagacaaccccaccgta
gtgcaggaaggatgcaggtataacgtgatgcacgtggcagccaaggagaacgagccaggg
atcgcccagctcctgctggagacgctggagaacccggacttcatgaggctcatgtaccct
gatgacctggaggccatgatgcagaaacgcatccgctacatcgtggacctttacctcaac
actccagacaaagctggctttgagacaccactccactttgcctgtaagttcgggtgtcca
gaagtggtgaatgtcctgtgttcacatcctgatacagataaaaactgcaaaaacaagtac
gaccagaagccatctgatgttatttgtgaaagaaaaaacaaaacccaagaggtgaaacag
aagatatgtgactatttggaagatcgctgttatatacgcctactgagggccatagacaac
tcatcccagcctgtcattgatgctccctggtcacctgagccatcagaaactcttcctcgt
tcgctggctcccaggctcacacgaagtcccatggatccggtgatggcagtcagggcattc
gctggcccactcagcccatctaaggcagatgagttccgtcgggtgtggaagacgcccccc
cgagacagggcagggtacttccagcacatcctgaagtctgaccctgaccgtggagcagag
agagtgggcagagaccttgccagggagttgggccacccctgggctgagtactgggacttc
ctggatagtttcacagacctgtcgtctgcagacggcctccgtaagctggaggagtacctc
aacaagaaggacttcagtcagcgtgcacacgaagaggcaggggagaacgtcaccagcaac
cgcttcagaaccccttccccagggaagcccaagaagttctgcaactccatctcggtgggg
gccttccttgacgagggtgatgacgtcagcctggaggagataaagaaccgtcagaatgcg
gcgctcaccagcttctcctcagcgtgttctaaggacagtatggcgggtgctgtgggtggg
ctggccctccatgagttccacatcctgcccgtgtcccaccacggtgccgatgacctcatc
gagacagctgccgagcgagaccttctgtgctcctccgtgtcagagagcctcctctcgccc
gtctgcaacaacggcctttgtccctccacgggggcagagaggactcacaacggggacaag
gggtccccccgcacctcctcgtccccctcccacctgctgtcgcccatctccaacctgatg
gtggagtttgagaggatgtccctgcaggacgggctggacagctttaccagggagcggagg
agtagcgggggacacagggagggactctcccggggcgaactggcagctggggtgggccgc
ctcacgctgggcggtaacagcaacgaggactatttgtttgagaggggctgtagcttggag
cctggggacagggagaggcgtgtgagggagggagaggtggaagaccgggccagtggtgga
agcggcagctcggaggagtactttacggctgaggagagcttggaggctctgggccagagg
actagcgggccagggacggtgtcggggcgcacgctctgctccagatctaagtcgtgggat
catggggggagggatctgagcagctccggatcatccagctcctatacatccctggacaac
tcccatgagttcatagcacggaccccacctcgcttcagaaggggacttttcattgaaggg
gattcgccaactaagttggaccgagaggtcctgtctgcaatagaagtcatagacattgac
ccctcaaagttccccagcattcagaaatggaaaaatacaatgcaaacatacacctcttca
gacatgcaaagctggcccagccctgtggcggtaaaaagcagcgccagggtacatcgggcc
tctcccctcacacatggctctcctgtcagcagccttttgtcccctgccggtggccgcttc
agtccagcccggcacacaggctctccagacttcaccagctgctacagccctgcacacgcc
agctacacccagcgcatccgtctcaggcacatcaacgacaccccccccctccctccaggc
cagaaacgatag
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