Oncorhynchus tshawytscha (Chinook salmon): 112248953
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Entry
112248953 CDS
T05605
Name
(RefSeq) C-Jun-amino-terminal kinase-interacting protein 1 isoform X1
KO
K04434
mitogen-activated protein kinase 8 interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112248953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248953
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
112248953
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
SH3_9
SH3_1
PID_2
Motif
Other DBs
NCBI-GeneID:
112248953
NCBI-ProteinID:
XP_042176776
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Position
LG04:49499780..49625677
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AA seq
807 aa
AA seq
DB search
MPNLSTQLSTPPLLCECTHLQHGLRRGKRGRVDGRPVGEMGLNRAIDALAGQIPLSRLVW
RLTHDISLNEFEDDDLSEITEITDECGMSLNYMGLEIKGCVRQGTNSGVGKEELGAVGQF
QAEMLHLDLIDGADGYRDDKESSKPSSTAPLPVTEDPPLVTMNIYRPKRPTTLNLFPMVP
RTQDTLNNNSFGKKYSWQEKVSLSSSPLKTGGLISPHEHSCLSDEDKLQHGGGTQTKDRG
TSTDTPCRYKHTSGHTESSTAGTRSKLPEKPPAPPPPQNYTLAPLGPPGTHREKIRYHTD
VRLEPTEEIYLTPVHRSEQDHPFLSQQPEHGRMSISSDNEGPPPYQPLPDRTNPSICEED
EVYMPPPSYASYVEALFTPPSTAPPMEPPGLALNLGMREGGAGAMVRAGAGVEYVDAQDE
TFGVEGEDERVRVVGGRQYLGRGGCGAPTSTLMSSEASGLSYDSVKYTLVVDEHAQLELV
SLRQCYQCYSDDSNSATVYDNCASSPYESAIGEKYKEEEEEEKEEEEEERVRRVRREAPA
CLSEDSTPEANLHFSKKFLNIFMNGRSRSSSAEPFGLFSCLINGEEREQSHRAVYRFVPR
HDDELELEVDDPVLVEVQAEDYWYEGYNMRTGTCGIFPAYYAIEVAKEPESFKVKSSDWV
DRYHMKFLGSVQVPYHKGNDVLCAAMQKIATNRRMTVQYNPPSSCILEINVKGVKLLVQD
DYYASDKSNQCSHFFQLKNVSFCGYHPKNNKYFGFITKHPADQRFACHVFVSEDSTKPLA
ESVGKAFQLYYKEFVDCSCPTEDIYLE
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacctatcgacccagctgagcacacctcctctcctctgtgaatgcactcacttg
cagcatggactccgcaggggaaagagaggaagggtggatggaagaccagtgggagaaatg
ggactaaacagggcaattgatgctttggcaggacaaatccctctttcccgattggtgtgg
aggttgacccatgacatcagcctgaatgagtttgaagatgacgacttgtctgagatcact
gagatcacagatgagtgtgggatgagtctcaactacatgggcctagagattaagggctgt
gtgaggcaggggaccaatagtggagtggggaaggaggagctgggtgctgtcggtcagttc
caggccgagatgctccatttggatctgatcgacggggccgatggttaccgcgatgacaag
gagtcatctaagccttcttccacagcacccctgccagtaaccgaggacccccctctagta
accatgaatatataccggccaaagagacccacgacccttaaccttttccccatggtgcca
cgcactcaggacacattaaacaacaactcatttggtaagaagtacagctggcaggagaag
gtctcgctctcatcctcccccctcaaaacaggcgggctgatctctccccatgagcacagc
tgtctaagcgacgaggacaagctgcagcacggaggtgggacgcagaccaaggaccgcggc
acatccactgacactccctgcagatacaaacacacctctggacacaccgagagctccaca
gcggggacacgctccaaactgccggagaagcccccagcacccccgcctccccaaaactac
acactcgcacctctgggccccccagggacacacagagagaagatccgctatcacacagat
gtacgcctagaacccaccgaggagatctatctgactcccgtgcaccgttccgagcaggac
cacccattcctgtcccagcagccagagcacggacgcatgtcaatcagctctgacaacgag
ggcccacccccttaccagcctctgcccgaccggaccaacccttccatttgtgaggaggac
gaggtttacatgccccctccctcctacgcctcctatgtggaggctctcttcacccctccc
tctaccgccccccccatggaacccccaggcttagccctgaacctcggcatgagggaagga
ggagcaggggcgatggtgagggcaggcgcaggggtggagtatgtagatgcccaagatgag
acatttggggtagagggtgaggatgagagggtaagggttgtgggaggcaggcagtatttg
ggacgtggtggctgtggtgcccccacgagtactttgatgagctcggaagcgagtggtctg
tcttacgactctgtgaagtacacactcgttgtggacgagcacgcgcagctcgaactggta
agtctgaggcagtgttaccaatgttacagcgacgacagcaactctgcgaccgtctacgac
aactgcgcctcgtctccatatgagtcagccataggggagaagtataaggaggaagaggaa
gaagagaaagaggaggaggaggaggagagagtgagaagggtgaggagagaagcccccgcc
tgtctgtcagaggactccaccccggaggcgaacttgcacttctctaagaagttcctcaac
atcttcatgaacggacggtcacgatcatccagtgcagagccgtttggcttgttctcctgc
ctcataaatggggaagagagggaacagagtcacagagccgtctacaggtttgtccctcgc
catgatgatgagctggagttggaggtggatgaccctgtactggtggaggtacaagcagag
gattactggtacgaaggctataacatgcgtacaggcacctgcggcatcttccctgcttac
tacgccatagaggtcgccaaggagccagagagcttcaaagtgaagagcagtgactgggta
gacaggtaccacatgaaattcctgggctcggtccaagtaccctaccacaaaggcaacgat
gttctgtgtgcagctatgcagaagattgccaccaataggaggatgacagtgcagtataac
ccaccttcgtcttgtatccttgagatcaatgtgaaaggcgtgaagctcctagtccaggat
gactactatgcctctgacaaaagtaaccagtgcagccacttcttccagttgaagaatgtt
tccttctgtggatatcaccctaagaacaacaagtactttggcttcatcacaaaacaccca
gctgaccagagatttgcctgtcatgtgtttgtgtctgaagattctactaaacccctggca
gagtctgttgggaaagcgttccagttgtactataaggaatttgtagattgctcctgtccg
acagaggatatttacctggaatag
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