Oncorhynchus tshawytscha (Chinook salmon): 112249300
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Entry
112249300 CDS
T05605
Name
(RefSeq) brain-derived neurotrophic factor isoform X2
KO
K04355
brain-derived neurotrophic factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112249300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112249300
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112249300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
112249300
NCBI-ProteinID:
XP_024274886
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Position
LG04:68986810..69003201
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AA seq
269 aa
AA seq
DB search
MTILFLTMVISYFSCMRAAPMRDAPGIRGHRTEGYLGAAVTAGQGHGTPQSGGGPGQHGG
LPSLTDTFEQVIEELLEVEGEASQLGPGADKGQGGGGPSSVVTTETKDVDLYASRVMISN
QVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAID
MSGQTVTVLEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRTTQSYVRAL
TMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcgtacttcagttgcatgagagctgctccc
atgagagacgccccaggtataaggggccaccgaacggaaggctacttgggtgctgcagtg
actgccggccagggccacgggactccacagagcgggggtgggccgggccagcatggggga
ctgccctcgctcacagacacatttgagcaggtgattgaggagctcttggaggtggaagga
gaagcatctcagctggggcctggagctgacaagggccagggaggagggggtccttcctct
gtggtcaccacggagaccaaggatgtcgacctgtatgcatcgcgggtgatgatcagcaac
caagtgcctttagagccacctctgctttttctcctggaggaatacaaaaactacctggac
gccgctaacatgtccatgagggtacgacggcattctgacccgtcgcggcgtggcgagctg
agtgtgtgtgatagtattagccagtgggtgacagctgtggacaaaaagacagcaatagac
atgtctgggcagaccgttaccgtcctggaaaaggtccctgtccccaatggccaactgaag
caatacttttatgagaccaaatgtaaccctatggggtacacaaaggagggctgccgtgga
atagacaagaggcattataactcccaatgcaggacaacccagtcctacgtgcgagcgctc
accatggatagcaaaaagaagattggctggcggtttataaggatagacacatcatgtgta
tgcacattgaccattaaaagaggaagatag
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