Oncorhynchus tshawytscha (Chinook salmon): 112249540
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Entry
112249540 CDS
T05605
Name
(RefSeq) tight junction protein ZO-2-like isoform X1
KO
K06098
tight junction protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112249540
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112249540
NCBI-ProteinID:
XP_042176738
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All DBs
Position
LG04:46290526..46394119
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AA seq
1277 aa
AA seq
DB search
MNLDCLQLGDWCSGARGGPWLRHTEEDQGGGGGGRGKRSAAGGQPRLEVPLLGGPWLNSE
ELRSSVVVLYAPAGNTCFLRLSSGMEETVWEQYTVNLQRDSKMGFGIAVSGGRDNPNVEN
GEMSIIVSDVLQGGPADGLLFENDRVIQVNSILMDNVPHSFAVQQLRKCGKTAKITVKRP
RKVALHSLKHPPSPGAESRDFGSTRYYDADDNQSDGGWHRGNGGPGYNREPRDLTPDNKS
YLDPNYGNRGRSRGRSKERASPSPELHHDNSSGRALDREPPSPERPQYSRERSRGRSMDR
ERRGGGGSPGGRSYSRGDSYERGGGRYGDGGGTGGRMVKSKSRDNLREPPRSPSPDLPRG
GARDLEPLEKPVNVLLVKNRPNEEYGLRLGSQIFIKEMTSTGLAAKDGNLQEGDIILKIN
GTVTENLSLNDAGKLIEKSRGKLQLVVQRDRRQILIRIPPLVDSDSEPDDISELESYSPQ
EDRRSRQSDLSSQSSNERENPRPLTSLEDSPRVAKMSAMASPFRVPPLQDPNAPGPAILT
SEGLPRLDEQPASAKITPKILLRPSPEDEELYGANTVMVSFQKGDSVGLRLAGGNDVGIF
IAGIQEGSPAEEEGLRTGDQIMKVNSVDFRGIVREEAVLFLLEIPKGEDVTILAQSKPDV
YNDILVSGRGDSFFIRTHFEYEREAPQSLAFSRGEIFKVVDTLYDGKLGNWLAIRTGKDK
QLLEKGIIPNKSRADQMASVQNSHKAAGTDRADFWRLRGQRAAKRKELRKSREDVSATPI
ATRFPAYERVVLREAGFRRPVVLFGPIADAANDKLANELPDLFVIAKTEPKDAGSEKSSG
VVRLNTIRQIIEQDKHALLDVTPKAVDTLNYTQWYPIVIFFNPDSKPGVKAMRQRVIPGS
NRSARKLYEQAVKLRKTCSHLFTATIDVNSANDAWYGSVKDSIREQQTQAVWVSEGKLDW
TEMDLDLHDDRMSYLSAMSADYLSMDSRLASDYDDTADEGGAYTDNELDNEPADQLHVSA
ISRSSEPVLAEEILRRCSPEIRGRVRRVGSREVLSSASPPPAFVPDPPKVKLLFRDEVVP
PIGSYEPPSRGYDSHSSSPASDPPPLTRTLNSFGKAKPLAPPPIAIKPSYNTQDTTCSTA
PNTAAFRGPEEPGESPEDPSLKSFLGKIKAFEKMDHFARTQRMLELQEAQNARLEIAQKH
PDIYAVPVKTQKLDHSRPQPIGSSSRPDPQTPPSKLPYSESCGFYPSEEEEYRRQLADHT
KRGYYQTNNQKYQDTEL
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggattgcctgcagttgggggactggtgttcaggggcccgagggggtccatgg
ctgcgccacacggaggaggaccagggtggaggtggtgggggccggggaaagaggagcgca
gcaggaggtcaacccaggctggaggtgcctctcctgggaggaccctggctcaactcggag
gaactaaggagcagcgtggtggtgctctatgctcctgctgggaacacatgcttcctccga
ctgagctcaggaatggaggagactgtttgggagcagtacactgtgaacctacagagggac
tccaagatggggtttggtatcgctgtgtcgggggggcgggacaaccccaacgtggagaat
ggcgagatgtcaatcatcgtgtcagatgtcttgcagggaggaccagctgatggactactg
tttgaaaatgaccgtgtgatccaagtcaactccatcctcatggacaacgtgcctcattcc
ttcgctgtgcagcagctacgcaaatgtgggaagaccgccaagataacggtgaagagacct
cggaaggtggctctccactccctgaaacaccctccctcccctggtgccgagagtcgagac
ttcggctccacccgctactatgatgccgatgacaaccagagcgacgggggctggcatcgt
ggcaatggtggtcctggttacaaccgcgagcctcgcgacctcacccccgacaacaagagc
tacctggaccccaactacggcaaccgggggagaagccgggggaggagcaaagagagggcg
tcgccaagcccagagcttcaccacgacaacagcagtgggcgggccttggaccgggagcct
cccagtccagagaggccacagtattcacgggaacgcagccgggggaggagcatggaccgg
gagagacgagggggaggaggaagtccaggtgggaggagctacagccggggagacagctac
gagcgaggaggggggaggtacggggatgggggaggtaccgggggaaggatggtgaagagt
aaaagtagagacaacctccgtgagccgccccgttcgccctctcctgacctcccccgagga
ggagctagagacctggagcccctggagaaacctgttaacgtcctgctggtcaagaacaga
cccaacgaagagtatggtctgcgtctgggcagtcagatattcatcaaggagatgaccagt
acaggactggctgccaaggatggaaacctacaggagggagacattatcctcaagatcaat
gggacagtaacagagaacctgtctctgaacgatgcagggaagctcatagagaagtctaga
ggaaaactccaactggtcgtccagagagaccgccgccagatcctcatccgtatcccgccc
ctcgtagactccgactccgaacctgatgatatctcagagctggagtcctactccccacag
gaggaccgtagatctcgccagtcggacctatcttcccagtcctccaacgagagagagaac
cccagacctctaactagcctggaagactctcccagggtagccaagatgtctgccatggcc
tcgccctttagggtgccccccctacaggacccaaacgccccgggccctgccatactgacc
tcagaggggctgccacgcctcgacgagcaaccagcgtcagcaaagattactcctaagatt
ctgctacgccccagcccagaggatgaagagctctatggcgctaacacagtgatggtgagt
ttccagaagggggacagtgtgggcctgaggctggcggggggtaacgatgtgggcatcttc
atcgcaggcatccaggagggtagtcctgccgaggaggaggggctacgcacaggagaccaa
atcatgaaggtgaatagcgttgacttccgaggcatcgtgagagaagaggctgttctgttc
ctgttggagattcctaaaggagaggacgtcaccatactggcccagagtaaacctgatgtc
tacaatgacatcctggtatctggtcgaggggactcgttctttatcaggactcattttgag
tatgagcgggaggctccccagagcctggccttctccagaggggagatcttcaaagtggtg
gacactctctacgatggcaagctgggcaactggctggccatccgcaccggcaaggacaaa
cagctgctggagaaaggcatcatccccaataagagcagggctgatcagatggcgagcgta
cagaactcccataaggctgctggcacggaccgtgccgacttctggcgtctgagaggtcaa
agggcagccaagaggaaggagctgaggaagagcagagaggatgtcagcgctacacccatc
gctacacgcttccctgcgtacgagagagtcgtgctcagagaggctggtttcagacgtcct
gtggttctgtttggtcctatagctgatgcagccaatgacaagctagccaacgagctgcct
gacctgtttgtcatcgccaaaacggagcctaaagatgccgggtcggagaaatcctcagga
gtggtgagacttaacaccatccgccagatcattgagcaggacaagcatgccctgctggat
gtgactcccaaggcggtggacactctgaactacacccagtggtaccccatcgtcatcttc
ttcaacccagacagtaaaccaggggttaaggccatgaggcagagggtgatacctggttcc
aaccgcagcgctaggaaactatatgaacaggctgtcaaactgaggaagacctgttctcac
ctattcactgctactattgatgtgaactcggccaacgatgcgtggtatggcagtgtgaag
gactctatcagggagcagcagactcaggctgtatgggtgtctgaggggaagctggactgg
acggagatggaccttgatctccatgacgaccgcatgtcatacctgtcagccatgtcagcc
gactacctgagcatggacagccgattggccagcgactacgatgacacggcggatgagggt
ggggcttacacggataacgagctggacaacgagccggctgaccaactgcacgtgtccgct
atcagccgctcctctgagcccgtgctggcagaggagatcctgcgcaggtgtagtccagag
atccgtggtcgtgtcaggagggtgggcagcagggaggtgctcagcagcgccagcccaccc
cccgcgtttgtacctgacccccccaaggtaaagctgctgttcagggatgaggtagtccct
cccatagggtcatacgagccccccagccgaggctacgactcccactcctccagccctgcc
agcgatccccctcctctcactcgcacccttaactcatttggcaaggccaagccactggca
cctccccccatcgccatcaaaccttcctataatacccaggacaccacctgcagcacggcc
ccaaacacagcggcctttaggggcccggaggagccaggggagagccctgaggaccccagc
ctcaagtcgttcctggggaagatcaaggcctttgagaagatggaccactttgcacgcact
cagaggatgctggagctgcaggaggcccagaacgccaggttggagatagctcagaagcac
ccagacatctatgctgtccctgtgaagacccagaaactggatcacagccggcctcagcct
ataggttccagctcgcgtcctgacccccagacccctccctccaagctgccatactctgag
agttgtgggttctaccccagcgaagaggaagagtaccgacgccagctggcagaccacacc
aagagaggctactaccagaccaacaaccagaaataccaggacacagaactttag
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