Oncorhynchus tshawytscha (Chinook salmon): 112249942
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Entry
112249942 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
otw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112249942
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112249942
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112249942
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112249942
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112249942
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112249942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Tc-R-P
Interfer-bind
PTP-SAK
DSPc
V-set
Y_phosphatase3
PTPlike_phytase
PTP-NADK
C2-set_2
Fn3_PTPRU
Fn3_ELFN
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
112249942
NCBI-ProteinID:
XP_024275467
LinkDB
All DBs
Position
LG01:34699373..35018324
Genome browser
AA seq
1922 aa
AA seq
DB search
MAPHHRRAEYPLARGAVLILLLGCLALPSPSHADSMPSFIKSPDDQTGISGGVASFVCQA
VGDPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTAINSVGEI
NTSAKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDFLPVD
INSSNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQRE
VRRVPPRFSIPPNNHEVMPGGSVNLTCVAVGAPMPYVKWMMGVVDLTKEEEMPIGRNVLE
VTNIRQSANYTCVAISSLGMIETTAQITVKALPKPPTSLIVTETTATSVTLTWDSGNPEP
VSYYVIQYRAKVSDNGFQEVDGVATTRYSIGGLSPYSEYEFHVMAVNNIGRGPPSSLVDT
RTSEQAPSSPPLAVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDLGAPLSAWHKHN
TDDSRLTTISGLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDT
RIMLSWLWPVQDQITKYELMYWEANSGNKLHVTFPPAGSYAVEGLKPDTLYMFSLAARSE
MGLGVYTQLIEARTAQSTPSAPPQEIVLLSLSSTSIKVSWRAPPAASRHGDIVRYTLAYK
AATGEDLERHEVSDIGADVSSYILEGLEKWSEYQVWVRAHTDVGPGPESPAARIRTKEDV
PGAPPRKVEADALNSTALRVMWKPPLQVKQHGQIRGYQVVFSRLENGAPRGQPNIMDVSL
PEAQETVITGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGRPTMMISTTIGNTA
LIQWQPPKEMVGEHMGYQLQYKRMEEESFTVKDFKKIEDHFTVTGLHKGATYIFKLCAKN
RVGNGEEYAKEITTPDDVPSSYPQNLSVVGLTTTTTKLAWEPPVLAERNGKIVQYIVVYR
DINSQQNHTNSTTETQMTIMGLQPDTTYDIRIRAFTSKGGGPISPSIQSRTMSTAMPEFT
KNFGVKAVMKTSVLLTWEVPETYKSQVPFKILYNQQSVEVQGNLKRKLITRLQPDTDYSF
VLMSRGNSAGGLQQQVSIRTAPDLLKTKPIQYQHDPEEGGKLTITLPKVPTTAPVRYYYI
VVVPVTPATLHRWENPEDMDLDELLEASSDQSLKRRQTQEFLRPYIAAKMDALPDTFPLG
DEKKYNGFYNKPLPGQQQYLCFVLAALKGHESQKTFAASPYSDPITVKLHSGMARHAEDP
EMLWVMGPVLAVVLIIIIVIAILLFKSKQERKRASPSAKDEHSVGVKDSLLAHSSDPVEM
RRLNYQTQGSSALSCPNTPRMMEHPFISTTDLANHIERLKANDGLRFSQEYESVDPGQQF
TWEHSNLEVNKPKNRYANVIAYDHSRVILTSVDGVPGSDYINANYIDGYRKQNDYIATQG
PLPETLSDFWRMVWEQRTNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVEL
ATYSVRTFTLYKNGSSEKREVRQFQFMAWPDHGVPEYPTPTLAFLRRVKACNPTDAGPMV
VHCSAGVGRTGCFIVIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYVFIHEALL
EAATCGNTEVPARNLYAHIQKLTQVTPGGTVSAMELEFKKLSNSKAHTSRFISANLPCNK
FKNRLVNIMPFESTRVYLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWR
MLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVT
DARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGR
TGVFITLSIVLERMRYEGVVDIFHTAKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHY
AT
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcaccaccggcgggcagaatatcccctcgccaggggggccgtgcttatcctg
ctcctgggctgtctggccctgccatcaccatcccatgcagacagcatgcccagtttcatc
aagtctccagatgaccagacaggtatttcgggaggcgtggcatcctttgtatgccaggcg
gtgggcgatcccaagccacgcatcacttggatgaagaagggcaagaaagtcagctctcag
cgctttgaggtgatagagtttgacgacggctcagggtccgtcctgcgtatccagcccctg
aggacccacagggacgaggccatctatgagtgtactgccatcaacagtgtgggagagatc
aacaccagcgccaaactcaccgtcctggaagaggaccagattccccatgggttccccacc
atagatatgggaccccagctgaaggttgtagagcggacccgtacagccaccatgctgtgt
gctgccagtggcaaccccgacccagagatctcctggttcaaggacttcctccctgtagat
atcaacagcagcaacggaagaatcaaacagctccgctcaggtggtacaccaatcagagga
gctctccaaatagaaaacagcgaggagtcggaccagggcaagtacgagtgtgtggcggtc
aacagcgccgggacccgctactcggctccagccaacctatatgtgagagatcaacgagaa
gtgaggcgtgtgccaccccggttctccatccctcccaacaaccacgaggtgatgccgggt
ggcagcgtgaacctgacgtgcgtggcggtgggagcacccatgccctacgtcaagtggatg
atgggggtggtagacctgactaaggaagaagagatgcccattgggaggaatgttttggag
gtcaccaacattcgccagtctgccaactacacctgcgtggcgatatcgtcgcttggtatg
atcgagaccactgcacagatcactgtcaaagccctgcccaagccccccacctccctgatt
gtgactgagaccacagccaccagcgtcactctgacctgggactccgggaaccctgagccc
gtgtcctactacgtcatccagtaccgggccaaggtctctgacaacggcttccaggaggtt
gacggagtagccaccacccgctacagcatcggagggctcagcccctactctgagtatgag
ttccacgtcatggcggtgaacaacattgggcgtggccctcccagcagcctcgtggacacc
agaaccagtgagcaggctccctcctctccaccgctggctgtacaggctcgcatgctcagc
gcatccactatgctggtccaatgggagcctcccgaggaacctaatggacagatcagaggt
taccgggtgtactacagctctgacctcggagccccgctgagtgcgtggcacaaacataac
actgatgacagcagactgaccaccatctcagggttgaccacagatatcacctacagcctc
agggtgctggggttcacctctgtaggggacggacctccgtctgatgtactgcaggtcaaa
acccagcagggagtaccagcccagccgtctagcttcgaggcagaggcagagttagacacc
cgcatcatgttgtcgtggctgtggcctgtccaggaccagatcaccaagtacgagctcatg
tactgggaggctaactctggcaataagctccatgtgaccttccctccagcggggtcctat
gctgtggagggtctgaagccagacactctctacatgttctccctggctgctcgctctgag
atgggtcttggcgtctacacccaacttattgaggccaggactgcccagtccaccccctca
gccccgccccaggagatagtcctgctgagcctcagctccaccagcatcaaggtgagttgg
agagcgccccctgcagccagccgccatggggacatcgtccgctacacactggcctacaag
gccgcaactggagaggacctggagcgccacgaggtgtcggacatcggggcagacgtctct
agttacatactggagggcctggagaagtggtcagaataccaggtgtgggtcagggctcac
acggacgtaggcccaggcccagagagccctgcagcccggatcaggaccaaggaggatgtg
cccggagcccctcccaggaaggtggaggctgatgccctgaactctacagccctgagagtg
atgtggaagccccccctccaggtgaaacagcatgggcagatcagggggtaccaggtggtc
ttctcacgactggagaatggagcgccacgaggccagcccaacatcatggacgtctcccta
cccgaggcacaggagactgtcataactggcctgctccctgagaccacctactctgtcact
gtggcagcctacaccaccaagggagatggggcacgcagtaaggccaaggtggtcaccaca
acaggagcagtcccaggcaggcccactatgatgatcagcaccaccatcggtaacacagcc
ctcatccagtggcaacctccgaaggagatggtgggagagcacatgggctatcagctgcag
tacaaacgcatggaggaggagtcgttcaccgtaaaagacttcaagaagatagaagaccac
ttcaccgtcaccggcctgcacaagggcgccacctacatcttcaagctctgtgccaaaaac
cgggtgggcaacggggaggagtacgcaaaggagattaccacgccagacgatgtgcccagt
agctacccccagaacctgagcgttgtgggcctgaccaccaccacaaccaagctggcctgg
gagcctccggtgctggctgagaggaacgggaagattgtccagtacattgtggtgtacaga
gatatcaacagccagcagaaccacaccaacagcacgacagagacccagatgaccatcatg
gggctgcagcctgataccacctatgatatcaggatcagggcattcaccagcaagggaggg
ggaccaatcagtcctagtatacagagcaggaccatgtctaccgccatgccagagttcacc
aaaaactttggtgtgaaagccgtgatgaagacgtcagtgctgctgacttgggaagtgcca
gaaacatacaagtctcaagtgcctttcaaaatactgtataaccagcagagtgtggaggtg
caggggaacctgaagaggaagctgatcacgaggctgcagccagacacagactacagcttt
gtgttgatgtctagagggaacagtgctgggggtctacagcagcaggtctctatcaggacc
gccccggacctgctcaagaccaaacccatccaataccaacacgacccagaggaggggggc
aagctcaccatcaccctgcccaaagtccccaccaccgcccctgtcagatattactacata
gtggtggttcctgtcacaccagccacactacacaggtgggagaaccctgaagatatggac
ttggatgagctcctggaggctagttctgaccagagcctgaagaggagacagacccaagag
ttcctcagaccctacatcgctgccaagatggatgctctcccagacaccttccctctagga
gacgagaagaagtacaacggcttctacaacaagcctctaccgggccagcagcagtacctc
tgtttcgtactggctgccctcaaaggccacgaatctcagaagacgtttgcggccagccca
tactcggaccccatcacagtgaagctccacagcggtatggctcgccatgctgaggaccca
gagatgctgtgggtcatgggccctgtcctggccgtcgtactcattatcatcatcgtcatc
gctatcctgctcttcaagagcaaacaagaaaggaaacgtgcatctccctctgccaaggat
gagcactctgttggggtgaaggactctctgttggcccactcctctgaccctgtggagatg
agacgacttaactaccagacacaaggttccagtgccctcagttgtccgaacactccaagg
atgatggagcaccctttcatctccaccactgatctggctaaccacatcgagcgacttaag
gccaacgacggactccgcttctcacaggagtatgagtccgtagaccctggccagcagttc
acgtgggaacactctaacctggaagtaaacaagccaaagaaccgctatgcaaatgtcatc
gcctacgaccactccagggtcatcctcacctccgtcgacggagtgccaggtagtgactac
atcaacgctaactacatagacggctacaggaagcagaacgactacatcgctacacagggc
ccgcttcctgaaaccctgagtgacttctggaggatggtgtgggagcagaggaccaacact
attgtcatgatgaccaggctggaggagaagtcaagggtgaagtgtgaccagtactggccc
agtcggggtacagagacctatgggatgatccaggtgaccatgttggacactgtggagctg
gctacctatagcgtacgcaccttcaccctctataagaatggctccagtgagaagagagag
gttcgtcagttccagttcatggcctggccggaccatggagtgcctgagtaccccaccccc
accttggccttcctgcgcagggtcaaggcatgcaacccgacagatgcagggcccatggtg
gtccactgcagtgctggtgtagggcggaccggttgcttcatcgtgatcgaagccatgctg
gagcgtatgaagcatgagaagtctgtggatatctacggtcatgtgacgtgtatgagagct
cagaggaactacatggtgcagacggaggaccagtacgtcttcatccacgaggccctgcta
gaggcagccacctgcggtaacacagaggtccctgcacgcaacctgtacgcacacatccag
aagctcacccaggtcacgcccggaggcaccgtttccgccatggagctagagttcaagaaa
ctgtctaactctaaagcacatacctcaagattcatcagcgccaacctcccctgcaacaag
ttcaagaaccggctggtgaatatcatgccttttgagtccacccgcgtgtatctgcagcct
atcagaggtgtggagggctccgactacattaacgccagcttcatcgatggatacaggcaa
cagaaggcctacatagccacccagggcccgctagcagagaccacagaggacttctggagg
atgctgtgggaacacaactctaccatcgtcgtcatgctcaccaaactcagagagatggga
cgggaaaagtgccatcagtactggcctgctgagcgctctgctaggtaccaatactttgta
gtggaccccatggctgagtacaacatgccccagtacatcctccgagagttcaaggtcaca
gacgccagggatggccagtccaggactattcggcagttccaattcactgattggccagaa
caaggggtgccaaaaactggagagggctttatcgacttcattggccaagtgcataaaacc
aaggaacagttcggacaggatggacccatctctgtgcactgcagtgctggtgttgggcgg
actggtgtgttcatcaccctgagtatcgtgctggagaggatgaggtacgagggggtggtg
gacatcttccataccgccaaaacactgaggacccagagacctgccatggtgcagacagag
gaccagtaccagttgtgctacagggcagctctggagtaccttggcagctttgaccactat
gcaacataa
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integrated database retrieval system
