Oncorhynchus tshawytscha (Chinook salmon): 112250262
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Entry
112250262 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF128-like
KO
K10629
E3 ubiquitin-protein ligase RNF128 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112250262
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112250262
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112250262
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf-Nse
zf_RING_Vps8_fungal
zinc_ribbon_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
112250262
NCBI-ProteinID:
XP_024276025
UniProt:
A0A8C8J809
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Position
LG30:14064067..14083189
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AA seq
406 aa
AA seq
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MIMEPLAKRYLFSWLFVALSLQVSSLHFAVATYYTAYLNVSFIDPANNETISRQGESGPT
LYGQDSPKVTVMGDVYLPDPIYSCESDTFYDVPSGSKGWIAIIQRGYECTFSQKINVAAS
KGAVAAVIFNGLGTNNTVIQMSHPGTGDMVAIMISHRRGMEIVELIRQGIPVSMTIEVVK
QHGVWMSHYSVFFVSISFFMITAVTVCYFIFYSARRLNVVRLQNLQQKQLKAEAKKAIGQ
LQVRTVKRGDKETGPDADTCAVCIDVYKSGDVLTILTCNHFFHKTCIEPWLMEHRTCPMC
KCDILKALGVEQPEEDQPSHQLTMHPDMTSYPRVLVPEDTRSETASAGYASVQCTEEHSS
PADETHVYETLGHHPGPGSIEVDIFQPHYDNLAFEGNSRNQREPLT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattatggaacctttagcgaaacggtatctattttcatggctgtttgtggctttaagt
cttcaggtgtcgagtttacattttgcagtagcgacttactacacagcctacctgaacgtg
tcgtttattgatcctgcaaacaacgaaaccatatcgcgacaaggggaaagcggaccaacg
ctatatggacaagattctcctaaagttacggtgatgggggacgtttatttacctgatccg
atttacagttgcgaaagtgatactttttatgatgtgcctagtgggtcaaaagggtggatc
gccataattcaacgcggctacgaatgtactttttcacagaagatcaatgttgcagccagt
aaaggagctgttgctgctgtaattttcaatggtcttggtacaaacaatacagtcatccaa
atgtcgcacccaggaacaggagatatggttgccatcatgattagtcacagacggggcatg
gaaattgttgagctgatcaggcaagggattccagtctcgatgaccattgaggtggtcaag
cagcatggtgtctggatgagccactattctgtgttcttcgtctccatctccttcttcatg
ataacagcagtaactgtttgctacttcatcttctactcggcccgccgcctcaacgtcgtt
cgtctacaaaaccttcaacagaaacagctgaaggcagaggccaagaaagccattggtcag
ctgcaagtccggaccgtgaaacggggagataaggagactgggcctgacgctgacacctgt
gcagtatgcattgacgtttacaagtctggcgacgtgctgaccattctcacctgcaatcat
ttcttccacaagacctgcattgagccctggctaatggagcataggacctgccccatgtgt
aaatgtgacatactcaaggccttgggagtagagcagccggaagaggaccagcccagtcat
cagttgaccatgcatccagacatgacgtcctaccccagggttctagtcccagaggacacc
cgcagtgagacagcctccgcaggctatgcttctgtacaatgcacagaggagcacagcagc
ccagcagatgagacccacgtgtatgagacattggggcaccatcctggtccaggatcaatc
gaggtggacatcttccagccccattatgacaacctcgcctttgagggcaactcaagaaac
caacgggaacccctgacatga
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