Oncorhynchus tshawytscha (Chinook salmon): 112250665
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Entry
112250665 CDS
T05605
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112250665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250665
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112250665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
ATG16
Motif
Other DBs
NCBI-GeneID:
112250665
NCBI-ProteinID:
XP_024276775
LinkDB
All DBs
Position
LG05:complement(46297922..46358535)
Genome browser
AA seq
1517 aa
AA seq
DB search
MAAGEALGESQLRRIIRDLHDAVAELTKEYRENGEPITDDSPNLHKFSYKLEYLLQFDQK
EKTTFLGTRKDYWDYFSDCLAKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLA
DTLQQCLMNQRVTSDWYYTRSPLLKSHLGVDIISHLYELNEVQFDVASRGHDLDSSWPTF
ARRTLGMPNSPGHMWKPPSRSSSINSLASTYSQQAHEFLGSPDNGPSMLSELNELLPSSV
EVSMLDELRLELDQSELKQRELLDRVQQMGEEGAELRRVVVELQRQLDVSLTAQEKQQGM
QGTLKDLEAREEALSCELESLRAGERAREIENRHLQEKLASAEGKNVELMTKLDGVLDEK
GQQATSYFDSAQKIHELLDRLKEAERGKIEALAEGEDRRRQADRLADELRVKEVAQKKDE
AKLESLSKSIAEGNAKFAECAEEQRNAIDKLKGALTLREKEVNNLQRQLQDLQSVLEEMK
RQAEEARNRAEEEKEEIQESICSLKEALEVEQLYLKEQLKSREAELLSSIQRLQHLEVQS
HSLTTERDILSANLSKMESSIREQANKIEEYKTQCTNLMELNGKLLDTVKRNEELKKELA
ESRAALEGEVAALRASDKHLRGHLDDAKVTVDEKDRKLREENRALDESLQRAAMAAAVSD
ASTKRLEQENQGLREEQATVRAALSSMQEELKSIHGQIGELEKSLGASRRSEASLQEQLK
DRKAQLENKEKGCAELQARVEALEARGRTLEKAKADAENACAKKTKLIERVTTEKQTVER
TQLQRSSAQAKESQEVAAKLTMVECQLEVNMKEVSRFQAEVMDLRVQLKTSGEDRMRSQA
QLEVMEAQKDALSTLTEQLKAQTEALNQRHVAELLQCKEREEALSRERDQEAATRSELAA
AEASTRGELATLKAQNERLAMENAEIREGLHRANTEMAELGMTICRLTAEREEAKEGWVG
EADRIGELEERTSGKVERLESCMAAMRQENTGLREELRMTEHLPGAMLELQDKLEKAECQ
VRSLQDTSLEEMEAVKFQMSSESMNHQNQIKSLKDELGKLRVQLPKEQEKVSSLEAKIFE
IEGVNEEYSRLIGEKDAHVAKSEAAIRQSEGEIQRLRDSVTSAEEALLAVQAAREELKKK
LEQAEVDRHSHCLRTTAEIDDLYRTKSTLEERLIELIKDKDILWQKSDALEFEQKLRAEE
RWLQDKEATHCLGCQGHFTWWLRRHHCRLCGRIFCYYCSNNFVMTKHSGKKERCCRECYT
QHRAVVERFTEGELSPSDTQLPPPVIGPHSLPKPAPYKPTPRVTVSDPSTKTDDGAYDII
TEEDANGIYDSDMLSLTTGDSLEGEQDTRPLGALEIGTGDTTPDDPEENVPTLQDAEIAL
LKSGEVTLVVPVSIDDISQFGDGSRELFVKSSCYSVISIVVVDCSPTVSWMFSSEPKSIS
FGMVYRVTADVPVEQSKVLIPLTRCNSHKEAIQGQLKVRNPGLYTLIFDNSFSRFISKKV
LYRLTLEKPVIYNGRDF
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggggaggctttgggggagagccagcttcggaggattatcagagatctgcat
gatgctgttgccgagctcactaaagagtacagggagaatggggagccaatcacggatgat
agtcccaatctgcacaaattctcctacaaactggagtacctgctgcagtttgaccagaag
gagaagacaacatttcttggcaccagaaaagactactgggattatttcagcgactgtctg
gccaagatcaaaggcgccaacgatggtatccgctttgtcaaatccatcccagagctgaag
acatctctggggaagggcagggctttcattcgctactccctggtgcaccaacgactggcc
gacactctgcagcagtgtctgatgaaccaaagggtaaccagtgactggtactatactcgc
agccccttgctgaaatctcacctcggtgttgacatcataagtcacctgtatgagctcaac
gaggtccagtttgacgtggcctccaggggtcatgaccttgactcgtcttggcccaccttc
gcaaggaggacactgggcatgcccaactcacctggccacatgtggaaaccacccagtcgc
agctctagcatcaacagtctggccagcacctactcacagcaggctcatgagttccttggc
agccctgacaatggcccaagcatgctgagcgagttgaacgagttgttgccttccagcgta
gaggtgagtatgttggacgagctccgcctggagctggaccagtcggagctgaagcagcgg
gagctcctggacagggtacagcagatgggggaggagggtgctgagctcagacgtgtggtg
gtggagctacagaggcagctggacgtgtcgctgaccgcccaggagaaacagcagggaatg
caagggaccctgaaagacctggaggcacgggaggaggccttgtcctgtgagctggaatcc
ctgagggctggggagagggccagggagatcgaaaatcgccaccttcaggagaagctggca
tccgcagaggggaagaatgtagaactaatgaccaaactggatggggtgttggatgagaag
ggccagcaggcgacaagctactttgactcggcacagaagatccatgagctactggacaga
ctgaaggaggctgagagggggaagatagaggctctggcagagggagaggataggaggaga
caggccgacaggctggcagatgagctaagggtcaaagaggtggcacaaaagaaggatgag
gccaagctcgagtcgctgtcaaaatccattgcagaggggaacgctaagtttgcggagtgt
gcagaggagcagcgtaatgccattgacaagctgaagggggcattgactttgagagagaag
gaggtcaacaacctgcagaggcagctgcaggacctccagagtgttctggaagagatgaag
agacaagcagaggaggccagaaacagagccgaggaggagaaagaggagatccaggaaagc
atatgcagtctgaaagaggccttggaggtggaacaactctacctgaaggagcagttgaag
agcagagaggcggagctgctctccagtatacagaggcttcagcacctggaggtccagagc
catagcctgacaacggagagggacatcctgagcgccaacctctccaagatggaatctagc
atcagggagcaggccaataaaattgaagagtacaagactcagtgcaccaacctgatggag
ctgaatgggaagttgcttgacacagtgaagaggaatgaggagctgaagaaggagctggca
gagagccgggcagccctggagggcgaggtggctgctctcagggcgtctgacaagcacctg
aggggccacctggacgacgccaaggtaacagtggatgagaaggacaggaagttgcgtgag
gagaaccgggccttggacgagagtttacagagggcagccatggccgctgcggtctcagat
gcctctaccaaacggctggagcaggagaaccaaggcctgagggaggagcaggctacggtg
agggcggcgctgagctccatgcaggaggaactgaagtccatccacgggcagattggagag
ctggagaagagcttgggggcatcccgcaggagcgaggccagcctgcaggagcagctcaaa
gaccggaaggcccagctagagaacaaggagaagggctgtgcagagctccaggccagggtg
gaggccctggaggccagaggaaggacactggaaaaggctaaggcagatgcagaaaatgcc
tgtgccaaaaagacaaagctgatagagagggtcaccactgagaaacagacggtggagaga
acacagctacagagaagctctgcccaggccaaggagagccaggaggtagccgccaagctg
actatggtggagtgccaactggaagtgaacatgaaggaggtgtccaggttccaggcagaa
gtgatggatttgagagtgcagctgaagacctctggggaggacaggatgaggagccaggcc
cagctggaggtgatggaggcccagaaagacgcactcagtaccctaacagagcagctcaaa
gcccagaccgaggcacttaaccagaggcacgtggccgagctcctgcagtgcaaagagagg
gaagaggctctgagcagggagcgtgaccaggaggcagccacccggtccgagttggctgcc
gcagaggcctccaccaggggagagctggccacgctaaaggcccaaaatgagaggctggcc
atggagaatgctgagatacgtgaaggcctccaccgggccaatacagagatggcagagctt
gggatgactatctgtagactgacagcagaaagggaggaggccaaggaaggctgggtgggg
gaggcagacaggataggggaactggaggagagaacttccgggaaggtggagcggctggag
tcctgcatggctgccatgcgccaggagaacaccggcctaagagaggaactgaggatgaca
gagcaccttccgggagccatgctggagctgcaggacaagctggagaaggcagagtgccag
gtgaggagcctccaggacaccagtctggaggagatggaggcggtcaagttccagatgagc
tccgagagcatgaatcatcagaaccagatcaagagtctgaaagatgagctggggaaactg
agggtccagctgcctaaagagcaggagaaggtgtccagtctggaggctaaaatctttgag
atagagggggtgaatgaggagtactcacggctgattggagagaaggatgctcacgtcgca
aagtcggaagccgctattcgtcagagtgagggagagattcagcgactgagagactctgtc
accagtgccgaggaggctctcttggcggtccaggcggcgcgtgaggagctgaagaagaaa
ttggagcaggccgaggttgacaggcatagtcattgcctcaggacgacagcagagatcgac
gacctctaccgaaccaagagcaccctggaggagcgcctcatcgaactaatcaaggataag
gacattctgtggcagaagtccgatgctctggagtttgagcagaagctgcgtgcagaggaa
cgctggttgcaggacaaggaggccacccactgcctgggctgtcagggccatttcacctgg
tggctacgccgacaccactgcaggctatgtggacgcatcttctgctactactgcagtaac
aactttgtgatgaccaagcacagtgggaaaaaggagcgttgctgtagggagtgttacacc
caacatagagccgtggtggagaggttcacagagggtgagctgagtccctccgacacccag
ctgccgccccccgtaattgggcctcactcactccccaaaccagccccctacaaacctact
cccagggttacagtgtcggaccccagcaccaagactgatgacggggcctatgacataatc
acagaggaggatgcgaacggtatctatgacagcgacatgctgtccctaaccacaggggat
tcactggagggggagcaggacacacggccactgggggcgctagaaataggcacaggagac
acgaccccagatgacccagaagagaatgtgcccactctgcaggacgcagagatcgccctt
ctcaagtctggagaagtcactctggtcgtccctgtcagcatcgacgacatctctcagttt
ggcgatggctcccgggagctttttgtcaagtccagttgctacagtgtgatctccatcgtc
gtggtcgattgcagccccaccgtgagctggatgttctcctcggagcccaagagcatctcg
ttcggcatggtgtaccgcgtgaccgccgacgtccccgtggaacaatccaaggtgctgatt
cctctgactcgctgtaactcccacaaagaggccatccaaggccagctgaaagtcaggaac
cctggtctctacacactcatcttcgacaactccttctcaaggttcatctccaagaaagtc
ctctaccgcttgacactcgagaagccggttatttacaacggaagggatttttaa
DBGET
integrated database retrieval system
