Oncorhynchus tshawytscha (Chinook salmon): 112250871
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Entry
112250871 CDS
T05605
Name
(RefSeq) transcription factor E2-alpha isoform X1
KO
K09063
transcription factor E2-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112250871
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
112250871
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
112250871
NCBI-ProteinID:
XP_024277134
UniProt:
A0A8C8CE58
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Position
LG05:complement(54256577..54283165)
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AA seq
687 aa
AA seq
DB search
MNEQQQQRMTAVGTQDKELNDLLDFSAMFAPPVANGKNRPTTLASSQFGGSALDERNGSG
SWGPGEQNSPPFNQGRGYGDGSHYNEHEGLSSPFLSSGIGGKNERIPYSSFGGQPGFLPS
DIVMPSPDAMSPSGLKSTSQFYPGSYPNNPRRRPPDGQLDTQPKKIRKPPGLPSSVYASS
SGDEYARDNGGYPGTKPGSVYPGSFYMQGNYLQEGLHPSSDPWASSGPLGQSGYSAMLGN
SPHIGQPGSFSAINPQDRMVRTAPQYKRQPLPLSPQNYPLHGSEVNGSLPPSFHSGSGSY
NHTPSINGADGIMANRGATAGSSGDEIGKALASIYPSDHNSNNFSSTPSTPVGSPQGIAG
AASQWPRPSGQSALSPNYEGQLHALQNKMEDRLEEAIHVLRSHAVQGPPGLGGGAHSDMH
SLLSAVSSVHNGGLGGLSQAFSNAGLALSNRHPAMGGNHHEEPTGLPPSSTLLHGHHASG
PPQSTGQSDGFTSLPGSVARSTHSSSGSDIKREDKEDEENSSIADKSEDEKKETKRIRAR
KEALTLQILSGLSGLSDPGDDPEDEDDEDLPPEVKVEREKERRVANNARERLRVRDINEA
FKELGRMCQLHLSNDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSG
VVGDSPMQLSGGHPGMGGDGHNPVSHM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagcagcagcagagaatgactgcagtgggaacacaagacaaggaactcaac
gacctcctggatttcagtgcgatgtttgcaccacctgtggctaatgggaagaacagaccg
acgacactcgctagcagtcagtttggcggatcagctctggatgagcgcaatggctctgga
tcctggggcccaggagaacaaaacagcccccccttcaaccagggaaggggctacggagat
ggctcccactacaatgagcacgagggcctgtcatcccccttcctcagctcaggaatcgga
ggtaaaaatgagaggataccatactcttcctttggtggccagcccggcttcctgcccagt
gacatcgtcatgcccagtccagatgccatgtccccctctgggctaaagtctacctctcag
ttctaccccggatcataccccaacaaccccaggaggaggcctcctgatggccagctagac
acccaacccaagaagatccgcaagccccctggcctgccgtcctcggtgtatgcctcttcc
tctggggatgaatatgcacgtgacaacggaggatatcctggcaccaaacctggctctgtc
tacccaggctctttctacatgcaaggtaactacttgcaagagggcctccacccctcttct
gacccctgggcctcctcaggacctctgggtcagtctggctactctgccatgctggggaac
tccccccacattggccagccaggctccttctctgccatcaacccacaggacaggatggtg
aggacagcccctcaatataagcgtcaacccctacctctgtccccacagaactaccctctc
catggcagtgaggtgaacggcagcctcccacccagcttccactctggctctgggagctac
aaccacacgccctccattaacggagcagacggcatcatggccaacagaggcgccactgca
gggagctcaggggatgagattgggaaggctcttgcatcgatctacccctcggaccacaac
agtaacaacttctcctccacaccctccaccccagtgggctcgccccagggaattgcagga
gctgcatctcaatggccaagaccttcagggcagtctgccctgtcacccaactacgaaggg
caactgcacgccctgcagaacaaaatggaggaccgtctggaagaggccatccacgtgctg
cgtagccacgctgtccagggcccgcccggcttggggggaggagctcactctgacatgcac
agcctgctgagcgctgtgtcgtctgtgcacaacggtggcctgggaggcctctctcaggcc
ttctccaacgctggcctggccctcagcaacagacaccctgccatgggaggaaaccatcac
gaggagcccacaggccttcctcccagcagtaccctgctgcacggtcaccacgcctccgga
ccccctcagtccactggacaatctgacggcttcaccagtctgccaggaagcgtggcccgc
tccacacactcgtccagcggctcggacatcaagagagaggacaaggaggacgaagagaac
tcctccattgctgacaagtctgaggacgagaagaaggaaaccaaacgcatcagagcaaga
aaggaggcgctgaccctccaaatcctctctggcctctcaggcctgtcagacccgggagat
gatccagaggatgaggatgacgaggaccttcctcctgaggtaaaggtagagcgtgagaaa
gagcggcgagtggccaacaacgcccgcgagcggctgcgagtgcgagacatcaacgaggct
ttcaaggagctgggccgcatgtgccagctgcacctcagcaacgacaaacctcagaccaag
ctgctcatcctgcatcaagccgtcaacgtcattctcaacctggagcagcaagtccgagaa
cgtaacctgaaccctaaagcagcgtgtctgaagcggcgggaggaggagaaggtgtctgga
gtggtgggtgactcccccatgcagctctcgggaggccaccccggcatggggggagacggc
cataacccagtcagtcatatgtaa
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