Oncorhynchus tshawytscha (Chinook salmon): 112251528
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Entry
112251528 CDS
T05605
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4 isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112251528
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112251528
BRITE hierarchy
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112251528
NCBI-ProteinID:
XP_024278283
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Position
LG09:64131402..64220040
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AA seq
1311 aa
AA seq
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MKGVRHPQLHARTNFPLLQTCSVSTEEACYTRKAQLIQLEFEGDLTRRFRGEWNESSTKH
QGGWNSSEKSWISKIIKKRVCTTFIEDCLSNGALCQCGGERETHGSIATRDYFGAAIVSQ
WDSAQHSSEYPTDAFGELEFAEAGRRHSHFLRLSCDTTPQMVYTLMTAHWGVPSPNLVVS
VVGGEGCEKVKTWVREVLRQGLVRAAQSTGAWIVTGGLREGVSHCVGEAVRDHAAAASSL
SQKKVIAVGVAPWGLVHNRQQLINAQGSFPARYYVQNTSRDSCCLDNNYQAFLLVDDGSV
GRRGGEMVFRAKMEDYISHQRTGIWGSGSIDVPVLCMLISGDAAMLERVDLSLKKATPWL
VLNGSGPAADLICELLDALSAGPMSPPSPQPEAEGSKSPSAELRDRARERVRRHFTAEAD
LEKLVDRALSIYQNRDLITVFHGEQESSDDFDTVLLKALVRASKRVSSDASEYTEELKLA
VAWNRVDIAKSELFNGGIQWQYEDLEDSMTDALINDKPQFVRLFTENGLNILDYLTYRRL
EGLYRSLSDSSLAYTLLQRRLTERQGLAGSLPTVPCSLDRASLLKSPISEPSSAKELSLY
EMSRLLWDILGDVCEPFYYSPLKLDQSTSTRRALKHMKKLLLEECTYKEQRCLSPWASLF
IWAVLQNRSEMAVYFWEMAGESVLSALAGCKILRELSKLESETETKLSMKELAQKFENLA
LDVFSECYQSSERRSFTLLIRKSPVWGGATCLQMATAADARLFFSHDGVQSLLSQIWWGD
MERSTKVWKLVLTFFLPPLIYTNLITFSQVSLSLSFREQEEEGKSEEVTHGRDTDSLDGG
DATVFSLADIMQTEEDAEEYAALRAKLKGASNPKRPFILQRWREFWFAPVTSFLGNVLMY
FLFLSLFAYILLVDFKPPPLHGPSTLEFVLYFWVFTMVCEEIRQTFFVGSNTIYQRMSLY
IQDMWNKCDILAISLFALGMCCRMFPWSYEFGRAVLAVDYMVFTLRLIHIFAIHKQLGPK
IIIVGNMMKDIFFFLFFLAVWLLAYGVANQALLYSYDPRPNWIFRRVFYRPYLHIFGQIP
IHEMDADKLEEGIQCTNNATLIEAGAEPCMSTYANWLVVILLVIYLLVTNILLVNLLIAM
FSHTFSKVQENSDTYWKFQRYKLILEYHSRPCLAPPFIIISHLHLFIKRRIRKIPSTKIK
HFVLEIRGRQASKLHMWEAIQKENILSAQNKRERESDSERLKRTSVKVDSVLKQMVKIQD
HNRRLRMLETELEYCSSALSWMVDALSQSNLIKPTRPPPILRDLTPLSPTN
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagtgaggcatcctcagctacatgcgagaactaattttccacttttacaaact
tgttcagttagcacagaagaagcatgctacaccaggaaagctcaactaatccaactggaa
tttgagggagatcttacaagaagatttcggggagaatggaatgaaagttccacaaagcat
caaggaggctggaactcttctgaaaagagttggatctccaagatcatcaagaagagagtg
tgcaccacattcatagaggactgccttagtaatggggcgctgtgccagtgcgggggtgag
cgtgaaacgcacggctccatcgctacgagagactatttcggtgcagccatcgtcagccag
tgggatagcgctcagcactcctcagagtaccccactgacgccttcggagagttggagttc
gcagaggctggcaggagacacagccatttcctgcgcctgtcgtgtgacaccacccctcag
atggtatacaccctgatgacagcccactggggggtaccctcccccaacctggtggtttct
gtggtggggggtgaggggtgcgagaaagtcaagacctgggtcagggaggtgctgagacag
gggctggtcagggcagcacagagcacaggggcgtggatagtgacgggggggctgagggag
ggagtgagtcattgtgttggggaagcagtgagggatcatgcggcggcggcctcctccctg
tcccagaagaaagtcatcgctgtgggcgtggccccctgggggttggtgcacaacagacag
cagctcatcaacgcacagggtagttttccagcacgatattatgtccagaacacatcccgt
gactcgtgctgcctggataataactaccaggccttcctgctggtggatgatgggagtgta
ggccggcggggaggggagatggtcttcagggccaagatggaggactacatctcccaccaa
cgcacaggcatctggggcagtggcagtatagatgtccctgtattgtgtatgctcatctca
ggggacgctgccatgctggagagggtggatctctctctgaagaaggctactccctggctg
gtgttgaatggttctggtccagcggcagaccttatctgtgagctgctggatgcactgtca
gccgggcccatgagccccccctctccccagccagaggctgaggggagcaagagccccagt
gcggaactgcgtgacagggcccgtgagagggtccggaggcactttactgccgaggcagac
ctggagaagctggtggacagggctctgagtatctaccagaacagagatctgatcacagtg
ttccacggagagcaggagagttctgatgattttgacacagtgctactcaaggctctcgtc
agagccagtaaacgtgtgtccagcgatgccagtgagtacacagaggagctgaagctagca
gtagcctggaacagggtggacatcgctaagagtgaactcttcaacggaggcatccaatgg
cagtatgaggacctagaggattccatgacggacgcgctgatcaacgacaagccccagttc
gtgcgtctcttcaccgagaatggcctcaacatcctggactacctgacataccggcgtctg
gagggcctgtaccgctcgctttccgacagctctctggcctacacgctgctccagcgccgc
ctcacagagaggcagggcttggccgggtctctgcccaccgtcccctgctctctggacagg
gcctcgctcctcaagagccccatatcagaaccctcgtcggccaaagagctcagcttgtat
gagatgtcaaggcttctatgggacatcctgggagatgtgtgtgagcccttctactacagc
cctctgaagttggaccagagcaccagcaccaggagagcactgaagcacatgaaaaagttg
ttgctggaggagtgtacatacaaggagcagcgctgtctctctccctgggcctctctgttc
atctgggccgtgctgcagaaccgcagcgagatggccgtctacttctgggagatggcaggg
gagtctgtcctcagtgctctggcaggctgtaagattctgagggagctgtctaagctggag
agtgagacggagaccaagctctctatgaaggagctggcccagaagtttgagaacttggcc
cttgatgtgttcagtgagtgctaccagagcagtgaaagacgctccttcaccctccttata
aggaagtctcctgtgtggggcggagctacctgtctgcagatggccactgcagctgacgcc
cgcctcttcttcagccatgacggcgtgcagtctctgctgtctcagatatggtggggagac
atggagaggagcacgaaagtctggaaactggtcctcacttttttcttaccccccctcatc
tacaccaacctcatcactttcagtcaggtctctctctctctctctttcagggaacaggag
gaggaggggaagtcagaggaggtgactcatggtcgggacacagacagtctggatggagga
gatgccactgtgttttctctcgccgacatcatgcaaacggaagaggatgctgaggaatat
gctgctttaagggccaaactgaaaggtgcctccaatcccaagaggcccttcatactgcag
cgctggagggagttctggtttgctcccgtgacctcgttcctgggcaacgtgctgatgtac
ttcctgttcctctccctgtttgcttacatcctattggtggacttcaagcccccgcccctt
cacggcccgtccaccttagagtttgttctctacttctgggtcttcaccatggtctgtgag
gagattcgacagacgttctttgtgggcagcaacactatatatcagaggatgagtctctac
atccaggacatgtggaataagtgtgacatcttggccatctcactctttgccctgggcatg
tgctgcagaatgttcccgtggtcctatgagtttggccgtgctgtgttggctgtggactac
atggtgtttacccttcgtctcatccacatcttcgccatccacaaacaactgggacccaag
atcatcatcgtcggcaacatgatgaaggacatcttcttcttcctcttcttcctggcggtg
tggctcctggcctacggcgtagccaatcaggcgctgctctactcctatgacccccgtccc
aattggatctttcgcagagtgttctacaggccatacctacacatatttggacagatcccc
atacacgaaatggatgctgataaactagaggaggggatacagtgcaccaataatgcaacc
ctgatcgaggcaggggcagagccctgcatgagtacctacgccaactggctggtggtcatc
cttctggtcatctacctgttggtcaccaacatcctcctggtcaatctgctcatcgccatg
ttcagtcatacattctcaaaagtgcaggagaacagcgacacctactggaagtttcagcgc
tacaagcttatcttggagtaccattccagaccctgcctggcgccacccttcatcatcatc
tcccacctccacctcttcatcaagaggcgcatccgcaagatcccctccacgaagatcaaa
cactttgttctggagatccgtggtaggcaggccagtaaactacacatgtgggaggccatc
cagaaggagaatatactgtctgcccagaacaaacgagagagagagagcgactcggagaga
ctcaaacgcacctccgtcaaggtggacagtgtcctaaagcagatggtaaagatccaggac
cacaaccgcaggctgagaatgctagagaccgagttggagtattgttctagtgccctctcc
tggatggtggacgctctctctcagagtaacttgataaaacccacacgtcctccgcccatt
ctcagagatctgacccctctttctccaactaactga
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