Oncorhynchus tshawytscha (Chinook salmon): 112251554
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Entry
112251554 CDS
T05605
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112251554
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112251554
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
112251554
NCBI-ProteinID:
XP_024278305
UniProt:
A0AAZ3PXD5
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Position
LG09:64227091..64299412
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AA seq
1257 aa
AA seq
DB search
MKNTDKRHEGGGRRTGTEKSEKDQSWIPKIIKKRVCTTFVEDSLSNGVLCQCGGVRETHC
SIATGDFFGAAIVSQWDSSQHSSEYPTDAFGELEFAGAGRRHSHFLRLSCDTPPHIMYSL
MTAHWGVPSPNLVVSVVGGREKVKPWVREVLRQGLVRAAQSTGAWIVTGGLREGVGRCVG
EAVRDHAAAASSLSQKKVIAVGVAPWGLVHNRQCLINSEGSFPARYYVQNTSHDSCCLDS
NYQAFLLVDDGSVGQRGGETAFRAKMEDYISHQRTGIWGSGSIDVPVLCMLISGDAAMLE
RVDLSLKKATPWLVLNGSGPAADLICELLDALSAGPMSPPSPQPEAEGSEKTSAELRDRA
RERVRRHFPAKADLEKLVDRALSIYKNRDLITVFHGEQESSDDFDTVLLKALVRASKRVS
SDASEYTEELKLAVAWNRVDIAKSELFNGDIQWKYEDLEDSMTDALINDKPQFIRLFNEN
GLNILDYLTYRHLEVLYRSLSDSSLAFTLLQRLLTERQGLAICSPKEALALKSPQNPMSP
LSGPSSVKELSLYEVSRLLWDILGDVCEPFYYSILGLDQSASTRRALKQVNKLLQGDCSY
REQSCLYPWASLFIWAVLQNRSEMAVYFWEMAGESVHSALAGCKILRELSKLESETETKL
SMKELAQKFENLALDVFSECYQSSESRSFTLLIRQSPVWGKATCLQMATSADARHFFSHD
GVQSLLSQIWWGDMKRSTKVWKLVLSFFLPPLIYTNLISFREHEEEVRSEEVPLGRDTES
LDGGDATMLSLSDIMQTEEDVEEYAALRDNLKSAPSSNPKRPFVLLRWREFWFAPVTSFL
GNVLMYFLFLILFAYILLLDFKPPPPHGPSTLEFVLYFWVFTMVCEEIRQTFFRGNTTLY
QRMKLYIEDMWNKCDITAISLFALGMCCRMFPWSYEFGRAVLAVDYMVFTLRLIHIFAIH
KQLGPKIIIVEKMMKDIFFFLFFLAVWLLAYGVANQALLYSYDPRPGWIFRRVFYRPYLH
IFGQIPIHEMDADKLEEGIECTNNATLVEAGAEPCMSTDHNWLVIILLVIFLLVTNILLV
NLLIAMFSHTFSKVQEHSDNYWKFQRYNLIVEYHSRPCLAPPFILISHLHLIIKRHIRKI
PSTKIKHFVLEIHGREASRLNTWEAIQKENILFAQNKREREKDSERLKRTSVKVDNVLKQ
MAEIRDHDRRLRMLETELEYCSSALSWMTEALSQSNLVKTTRPPPALRDLTSLSPTS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatacggataaaaggcacgaaggaggcggaaggagaacgggaacagaaaaatca
gagaaagatcagagctggatccccaagatcatcaaaaagagagtttgcaccacgttcgta
gaggactcattaagcaatggggtgttgtgtcagtgtggtggtgtgcgggagacacactgc
tccatcgctacaggagacttcttcggggcggccatcgtcagccagtgggacagctctcag
cactcctcagagtaccccaccgacgcattcggcgagttggagttcgcaggggccggcagg
agacacagccatttcctgcgtttgtcatgtgacaccccacctcatatcatgtacagcctg
atgacggcccattggggtgttccctcccccaacctggtggtttctgtggtgggtggtcgc
gagaaggtcaagccctgggtcagggaggtgctgagacaggggctggtcagggcggcacag
agcacaggggcgtggatagtgacgggggggctgagggagggggtgggacgttgtgttggg
gaagcagtgagggatcatgcggcggcggcctcctccctgtcccagaagaaagtcatcgct
gtgggcgtggccccctggggcctcgtgcacaacagacagtgtctcatcaactctgagggt
agttttccagcacggtattatgtccagaacacgtcccatgactcgtgctgcctggatagt
aactaccaggccttcctgctggtggatgatgggagtgtaggccagcggggaggggaaaca
gccttccgggccaagatggaggactacatctcccaccagcgcacaggcatctggggcagt
ggcagtatagatgtccctgtattgtgtatgctcatctcaggggacgctgccatgctggag
agggtggatctctctctgaagaaggctactccctggctggtgttgaatggttctggtcca
gcggcggatctcatctgtgagctgctggatgcactgtcagccgggcccatgagccccccc
tctccccagccagaggctgaggggagcgagaagaccagtgcggagctgcgcgacagagcc
cgtgaaagggtccggagacacttccctgccaaggcagacctggagaagcttgtggacagg
gctctgagtatctataaaaacagagatctgatcacagtgttccacggggagcaggagagt
tctgatgattttgacacagtgctactgaaggctctcgtcagagccagtaaacgtgtgtcc
agcgatgccagtgagtacacagaggagctgaagctagcagtagcctggaacagggtggac
atcgctaagagtgaactcttcaacggagacatccaatggaagtacgaggacctggaggac
tccatgacagatgcgctgatcaacgacaagccccagttcatacgtctcttcaacgagaac
ggcctcaacatcctggactacctaacctacaggcatctggaggtcctgtaccgctcgctg
tccgacagttctctggccttcactctgctccagcggcttctcacagagagacagggcctg
gccatatgctctccgaaagaggccttagccctcaagagcccccagaaccccatgagcccc
ctatcaggaccctcctctgtcaaagagctcagcttgtatgaggtgtcacggcttttatgg
gacatcctgggagatgtgtgtgagcccttctactacagtattctcggtttggaccagagc
gccagcaccaggagagcactgaagcaagtgaataagttgttgcagggggattgttcgtac
agggagcagagctgtctctatccgtgggcctctctgttcatctgggctgtgctgcagaac
cgcagcgagatggccgtctacttctgggagatggcaggggagtctgtccacagtgctctg
gcaggctgtaagattctgagggagctgtctaagctggagagtgagacagagaccaagctc
tctatgaaggagctggcccagaagtttgagaacttggcccttgacgtgttcagtgagtgc
taccagagcagtgagagtcgctctttcaccctccttataaggcagtctccggtgtggggc
aaagctacctgtctacagatggccacctcagccgacgcccgccacttcttcagccacgat
ggcgtgcagtctctgctgtctcagatctggtggggagacatgaagaggagcacgaaggtc
tggaaactggtcctctccttcttcttaccccccctcatctacaccaacctcatcagcttt
agggaacatgaggaagaggtgaggtcggaggaggtacctcttggtcgagacacagagagt
ctggacggaggagatgccactatgctctccctctccgacatcatgcaaacggaagaggat
gtcgaggaatatgctgctctaagggacaatctgaaaagtgccccctcctccaatcccaag
aggcccttcgtattgctgcgctggagggagttctggtttgcgcccgtcacctcgttccta
ggcaacgtgctgatgtacttcctgttcctcatcctgtttgcttatatcctattgttggac
ttcaagcccccgccgcctcacggcccgtccaccttagagtttgttctatacttctgggtc
ttcaccatggtctgtgaggagattcgacagacattcttcaggggcaacaccactttatat
cagagaatgaagctctacattgaggacatgtggaataagtgtgacatcacagccatctca
ctctttgcactgggaatgtgctgcagaatgttcccgtggtcctatgagtttggccgtgct
gtgttggctgtggactacatggtgtttaccctccgtctcatccacatcttcgccatccac
aaacagctgggacccaagataatcattgttgaaaaaatgatgaaagacatattcttcttc
ctgttcttcctggcggtgtggctcctggcctacggcgtagccaatcaggcgctgctctac
tcctacgacccccgtcccggttggatatttcgcagagtgttctacaggccatacctacac
atatttggacagatccccatacacgaaatggatgctgataaactggaggaggggatagag
tgcaccaataacgccactctggtcgaggctggggcagagccctgcatgagtaccgaccac
aattggctggtgatcatcttattggtcatcttcctgttggtcaccaacatcctcctggtc
aacctgctcatcgccatgttcagtcacacgttctccaaagtgcaggagcacagcgacaac
tactggaagttccagcgctacaatttgatcgtggagtatcactccagaccctgcctggca
ccacccttcatcctcatctcccacctccacctcatcatcaagagacacatccgcaagatc
ccctccacgaagatcaaacactttgttctggagatccatggtagggaggccagtagactg
aacacgtgggaggccatccagaaggagaatatactctttgcccagaacaaacgagagaga
gagaaagactcagagagactcaaacgcacctccgtcaaggtggacaatgtattaaagcag
atggcagagattcgggaccacgaccgcaggctgagaatgttggagaccgagttggagtac
tgttctagtgccctctcctggatgacggaggctctctctcagagtaacttggtaaagacc
acacgtcctccgcccgctctcagagatctgacctctctctctccaactagctga
DBGET
integrated database retrieval system
