Oncorhynchus tshawytscha (Chinook salmon): 112252802
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Entry
112252802 CDS
T05605
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112252802 (ret)
04020 Calcium signaling pathway
112252802 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112252802 (ret)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
112252802 (ret)
Protein kinases [BR:
otw01001
]
Receptor tyrosine kinases (RTK)
RET family
112252802 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
112252802
NCBI-ProteinID:
XP_024280187
LinkDB
All DBs
Position
LG06:complement(60357376..60389608)
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AA seq
1112 aa
AA seq
DB search
MGQTCGFSLGNIVLVLLLLCEGSVGLYFPQNQYKETVYVGQSAGTPVLQVHAMVESDSQR
PHFYLCYLRPPTYAPWFHLDETTGILSMNKTLEWSDFDSAYKFWKLPLSVIAATRPLKKF
LCGLGHPTVQVSLTFINDTAPPCGQTRPELKKLCFPDKDLSSHIKENRFPGALRQLRQLT
RLNVCPNYTISYSVESDVPAPFAVNDNTTELVVTAPLDREESETYSPMLICTVQTDTMVD
TFFVTLHINVYDEDDNAPYVSGTDTEDVVLEFDRKQGSSFGNLVVYDRDTTPRYPKSQSQ
NRFVGNMMTNDSWINEMFTIEYSFKEEKAIFGNVRGTVHEFRLALKKNLSVTENRTFQLD
YLVNDTTYPGPEGTVMLHYNITVLPVPILFTNVTYLFALTRRANVYSQVGRICVDNSLKF
QGINVTYRLVVAEKTGNVSDDVQSCYAAISIAQSLKDMVGVLYVNDTEALRRPECQDLQY
VVIAQEQQNLLQASTQILVVLDSDIDKQGLEDQQFLSCAKGRQRGDCETIRGLGATTGRC
QWRQGSAKGISESYSTCSPDLRTCPDGFCDAVESKDASICPQDCTIEPVIGGHEKGIMSG
IRAGHGTCYCYSEKCFCEKDDIEEAMCDEVCKTIIATAVLLSFIVSILLSSYFIHRYHKN
SPKPPITSAEMTFRRPAQSYPISYSANNMRRGSLDSMENQVAIDTFKIPEDPKWEFPRKN
LVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKDHASHSELRDLLSEFTLLKQVN
HPHVIKMYGACSQDGPMYLIVEYAKYGSLRNFLRESRKVGPSYMSGNDANRNSSYLENPD
ERALTMGDLISFTWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE
DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN
LLKTGYRMEKPENCTEEMYNLMLRCWKQESNKRPIFIDISKELEKMMVKNRDYLDLAAST
PADALLYDDALSEEDTPLVDSNNAPLPRTIPSTWIENKLYGMSYPNWPEKSPVLLNRLDA
TNPVFTRYANDSVYANWMALPSPAKIVEKIDS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaacgtgtggtttctctctgggaaacatcgttttggtcctcctgctgttgtgt
gaagggtcagttgggctctacttcccccagaatcagtacaaggagactgtgtacgtcggg
cagtctgcagggacacccgtgctccaggtccacgccatggtggagagcgactctcaacgg
ccccacttctacctgtgctacctgaggcctccaacctatgccccatggttccacctggac
gagaccacagggatactctccatgaataagaccctggagtggagcgactttgactctgca
tataagttttggaagctgccgctgagtgtcattgctgcgaccagaccgttgaagaagttc
ctctgtggcctcggccaccccaccgtacaagtcagcctgaccttcatcaatgacacagcg
ccaccgtgtggccagaccagaccagagctgaagaaactgtgcttccctgacaaagacctg
agctcccacatcaaggagaacaggttccccggcgccctccgccagctcagacagctcacc
aggcttaacgtctgccccaactacaccatctcctacagtgtagaatccgatgttccggcc
ccattcgctgtgaatgacaacaccactgagttggtagtgactgctccgttggaccgcgag
gagagcgagacatacagtcccatgctgatctgcacagtgcagactgacacaatggtagac
accttttttgttacactgcatatcaacgtctacgacgaggacgacaatgcgccgtatgtc
agtggaacggacacagaggacgtggtactggaatttgatcgcaagcagggaagttctttt
ggcaacttggttgtctatgatagagacacaacacccaggtatcccaaatcccagagccag
aatagatttgtcggaaatatgatgaccaatgactcatggataaatgaaatgttcaccata
gaatactctttcaaagaagagaaggccatttttggcaacgtccgaggcactgttcatgag
ttccggcttgcactgaagaagaatttgtctgtaaccgagaataggaccttccagctggat
tacctggtcaatgacactacataccccggtccagagggaactgtgatgctgcactacaat
atcaccgtcttacctgtccccattctcttcaccaatgtgacatacctcttcgcactaaca
cgtagagctaatgtctactcccaggtcggtaggatttgtgtggacaacagcctgaagttc
cagggcatcaatgtcacataccggctagtagtagcagagaagacagggaatgtgtccgac
gacgtacagtcatgctacgctgcgattagcattgcacagagcctcaaagacatggtgggg
gtgctatatgtgaacgacacagaggcgcttcgcaggccagagtgccaggacctgcagtat
gtggttattgctcaagagcaacagaatctgctgcaggctagcactcagatcctcgttgtg
ctcgatagcgatattgataagcagggcctagaggaccagcagttcctctcctgtgcaaag
ggaagacagcgtggggattgtgagaccatcagaggactgggggcaaccacagggaggtgc
caatggagacagggctctgcaaaaggaatatcagaaagttattccacctgctcccctgac
ctccgcacgtgccctgatggcttttgtgatgcagttgaaagcaaagacgcatcaatatgt
cctcaggattgtacaattgaacccgttataggtggtcatgagaagggcatcatgtctggc
attagagctggccatggaacctgctactgctactctgaaaaatgcttctgtgagaaggat
gatatagaggaggccatgtgtgacgaggtctgcaagaccatcattgccactgccgtgctg
ctctccttcatcgtctccattctcctgtcctcctacttcatccatcgttaccacaagaac
tcccccaagccgcccatcacctcggctgagatgaccttccggcggcccgcacaatcctac
ccaatcagctactccgctaacaacatgcgccgtggctcgttggactccatggagaaccaa
gtagccattgacaccttcaaaatacctgaggatcccaaatgggaatttccacgcaaaaac
ctggtgctgggcaaaacgttaggagaaggggagtttgggaaggttgtcaaggcgactgca
ttccggctgaaaggaaaggctggttacaccacagtagctgtgaaaatgcttaaagaccac
gcctcacatagtgaactgcgggacctcctgtcagaattcaccttactgaagcaagtcaac
catccgcacgtcatcaagatgtacggagcctgcagccaggatggtccaatgtatctgatt
gtagaatatgccaaatatgggtcactgcgcaacttcctgcgtgagagccgaaaggtggga
cccagctacatgtcaggcaacgatgccaaccgcaactcgagctacctggagaatccagat
gagagggcactcaccatgggcgacctgatctctttcacctggcagatctccaggggcatg
cagtacctggctgaaatgaagcttgttcacagggacctcgctgcaagaaatgtcctagtt
gcggagggccgtaagatgaagatttcagactttggtttgtcccgggacgtgtatgaggaa
gactcatatgtgaagaggagcaagggtcgaatcccagtgaaatggatggcaatagaatcc
ttgtttgatcacatttacacaacacaaagtgacgtctggtcctttggtgtgctgttgtgg
gagattgtgacactgggtggaaacccgtacccaggcatcgcccctgaacgcctctttaac
ctcctcaagactggctacaggatggagaaaccagaaaactgtactgaggaaatgtataat
ctgatgcttcgatgctggaaacaggagtcaaacaaaaggcccatattcatagacatcagc
aaagaactggagaagatgatggtgaaaaaccgggattacctggacctggcagcgtctacg
ccagccgacgccctactgtacgacgacgccctctccgaagaggacacacccctagtggac
agcaataatgcccctctccctcgaaccattccctccacatggattgaaaacaagctctat
ggcatgtcatacccgaactggcctgagaagagccccgtactgctcaacagacttgatgcc
actaacccagtctttacaagatatgccaatgatagcgtttatgcaaactggatggctttg
ccttcacccgcaaaaattgtggagaagattgatagttaa
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