Oncorhynchus tshawytscha (Chinook salmon): 112252990
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Entry
112252990 CDS
T05605
Name
(RefSeq) DNA nucleotidylexotransferase
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112252990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112252990
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
112252990
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
112252990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
DNA_pol_B_palm
BRCT
NTP_transf_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
112252990
NCBI-ProteinID:
XP_042178966
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All DBs
Position
LG01:51911011..52039686
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AA seq
501 aa
AA seq
DB search
MNHAGMLALVKKRKRPVEAGAQGQVEVKFKEVTLYLVERKMGSSRRNFLTSLARSKGFRV
EDVLSDDVTHVVAEDNQAEVLWAWLKGHGLRDVSRVAVLDISWFTDSMREGRPVRVETRH
CIQNTPTGTDCSPPTAVANVSQYACQRRTTTENHNKIFTDVMEELAESSEFNESKGPCLA
FRQAASVLKSLPSAVHCLEAIQGLPCLGENTKAVMEEILTFGRSFKVEEIRCDERYQALK
LFTSVFGVGPKTAEKWYRRGLRSLQEILTEPNIQLNRMQRAGFLYYSDISKAVSKAEAKA
LGCIIEETVHWIAPDATLALTGGFRRGKEYGHDVDFLLTMPEMGKEEGLLLHVIDRLKDQ
GILLYCEYQGSTFDVSKLPSCRFEDMDCFQKCFLILRLEQGQVEGERGLQMDPGDSRGWR
AVRVDLVAPPVDCYAFALLGWTGSRQFGRDLRTFAQKERQMLLDNHALYDKTKKLCLLAT
TEEDIFAHLGLEYVEPWQRNA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgctggcatgctagctcttgtgaaaaagaggaagaggccggttgaggctggt
gctcagggtcaggtagaggtcaagttcaaggaggtgactctgtatctggtggagaggaag
atgggcagcagtagaaggaactttctgaccagcctggccaggtcaaaaggctttagggtg
gaagatgtcctcagtgatgatgtcactcacgtggtggcggaggacaatcaggctgaggtg
ttgtgggcatggctgaagggacatggtctgagggatgtctccagagtggctgtgctggac
atctcctggttcacggacagcatgagggaggggagacctgtcagagtggagaccaggcac
tgtattcagaacacacccacagggacagactgttctccacccactgctgtggccaatgtt
tctcaatacgcatgtcagaggcggacgaccacggaaaatcacaacaagatattcacagat
gtgatggaggagctggctgaaagttctgagttcaatgaaagtaagggtccatgcctggca
ttccgtcaagcagcctcagtcctgaagagtctgccgtcagcagtgcactgtctggaggcc
atccagggcctcccctgcctgggggaaaacaccaaggctgtcatggaggagatccttaca
tttggccgctcttttaaagttgaagagatacggtgtgatgaacgatatcaagcacttaag
ctgttcaccagtgtgttcggggttggacccaaaacagctgagaagtggtaccgcagaggg
ctgcgctcactccaggagattttgaccgagcccaacatccagttgaacaggatgcagaga
gctggtttcctgtattacagtgacatctccaaggctgtcagtaaagccgaggccaaagct
cttggatgcatcatcgaagagacagtccactggatcgcacccgatgctacactggctctg
acaggtggctttcgcagggggaaagagtatgggcatgatgtggacttcctcttgactatg
cctgagatggggaaagaagaggggctactgcttcatgtgattgacagactgaaggaccag
ggcattctgctgtactgtgagtaccagggttccacctttgatgtgagcaagctgcctagt
tgcaggtttgaggacatggactgcttccagaagtgcttcctgatcctgaggctggaacag
ggccaggtggagggggagagagggctgcagatggacccaggggacagcaggggctggagg
gccgtacgggtggacctggtggctccacctgttgactgctacgcctttgccctcctaggt
tggaccggctccaggcagtttgggagagatctgaggacatttgcccaaaaggagaggcag
atgcttcttgacaaccatgccctgtatgacaaaactaagaaactatgcctactggcgact
actgaggaggacatctttgcccatctgggtttggagtatgtggagccttggcagagaaat
gcataa
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