Oncorhynchus tshawytscha (Chinook salmon): 112253874
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Entry
112253874 CDS
T05605
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112253874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112253874
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
112253874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
TssO
Motif
Other DBs
NCBI-GeneID:
112253874
NCBI-ProteinID:
XP_024281703
UniProt:
A0A8C8C141
LinkDB
All DBs
Position
LG07:complement(9028898..9099927)
Genome browser
AA seq
1531 aa
AA seq
DB search
MMSGMETSAPTTTEKKGSGLDGNGFTDLPKKLSPSAVTRAPHHVFPTFHTPIPIDMRHHE
GRYLYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPTHPYFNPHMEHYLR
SIHSSPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASHRNPYGE
LLMQGGGAAAAHLPDYITPMDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSP
NSLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTP
PLIQPPPTFSSRQSALGLSSLPPASHNHNNGSQSKNTSGDSAVSSTVNPMITKRSKVKTE
VECPRPLSPCSPDHLGGMLDMKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQEQLVHH
INNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRL
ENLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTD
PSSLRKHVKTVHGPEAHVTKKQRSDVPPSRPMPPKENGENETGRGMEEKMDSTSRGTEDY
LQATSIKTENSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSSGGSMGDLTGLDD
PSGPLMDSSFSGLWSGTAGVGVGLHLRQHLGLSHIHRLEHLKKEKLKTVRDSCQWANHHP
SPPVQNTKLPPIPVSGSLLERGNMDGGPGSFLSLSELCSSKVTVLNQLDHLMERRDSATS
TVSSAYISRRSSGISPCHYSRRSSDASTFSGHRHHNISSTGSYDPISTDLSRRSSNASQS
GGGGGLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCMALYRDASQGDSL
SGYSSFNPIAPSGVPRRCSGDMGGYNGRSMMPHEAPSNIPRRASDPVPRPLPLDPLSHQP
QVQRYNSTGNMQNLHPHASQPNQAPSAAERRHLAPQSHQPRSDSSLQRYPYCPRPPSISE
NVAMETMAGDMSGSRNNSEEEMMVLPDDVVHYIASQGGAGESDCANGYNRQAQCGFRGNT
INPNPQQKQQFYHQQRMAVVDTNMNMNPSSAPQTMPLFCALSSGNPQQSFPSLPSKTSTM
PVQWNEVSSGTVEALHNPSQQLPFGRSNPNLAMVQQKQNFVSFQNQNLNSNQHIAQMIHN
LAHAAQQGRYIELQKADSRLSCVQQQSLQQQQPANANLNEPVSLGHGFNQGLGPSDATAN
ANQRSSCSSMAVGGTLRKLSQNSKQQQTVHTVDTQNSRLGAQPGGSQSSQVTFKDSGVNS
SRMISQKYNIASQVQLPIQNGGQILLQPRPPTEPKSLSKQHSGSMTMQRQNSIGNHCSNG
NNKDSNVMYYTGQIHVFEPNGNVNMQMMASSVVDVLQCPSDSTETAMTSPGVSNQVSSTV
DSSNGTGAEEPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSLP
LPAGGSNMAIGDMSSLLTALAEENKFLNMMS
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccggaatggagacctctgccccgacgaccacagagaagaaaggctctggtctg
gatggaaacggcttcactgacctcccgaagaaactctcaccttcagctgtcaccagagcc
cctcaccacgtcttcccgacgttccacacgcccatcccgattgacatgcgtcaccatgag
ggaagatacctctatgaaccccacaccctacatgccatgcatggtcctggactaggtggc
agcccggtcatgtcagacatctctctgatccgtctgtccccccacgcagccggaacgggg
gagtcccccttcagccccactcacccctacttcaaccctcacatggagcactacctccgc
tccattcacagcagcccaaccctgtccatgatctctgcggcccgcggactcagccctgca
gacttggcgcatgaacacttgaaagagcggggtctgtttgggttgccccctccccctcct
ggagccagccctgctgagtactaccacctgatggccagccaccgtaacccctacggagag
ctgctgatgcaggggggtggggcggcagctgcacacctgccagactacatcacccccatg
gatgtgtcacggttctccagtcccagactgacccccaggctgaacagaaagcgagccctg
tccatctctcctctctcggatgccagcatcgacctgcagaccatgatccgtacctcaccc
aactctctggtggcttacatcaacaactcacgctccagctctgcagccagcagctcctac
ggacacctctctgttggaggcatcagtccgtcctttacattcccccaccacatcaacccc
atggcctaccagcagctcttgtcccagcagagaggcctgagtgtgttcggccacaccccc
cctctcatccagcccccacccaccttctccagtcgccagtctgccctgggtctctcctct
ctgccccccgcctcacacaaccacaacaatggctcacagtcaaagaacacaagtggggac
tcggcagtgagcagtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagag
gtggagtgtccgaggccactgtccccatgttctccggatcatctaggtgggatgctggac
atgaaggaggacttggataaagatgaatgcaagcatgagccagagatggtgtatgagacc
aactgccactgggaaggatgctccaaggagtacgacacgcaggaacaactggtccatcac
atcaacaacgaccacatccacggggagaagaaggagtttgtgtgccgctgggatgagtgt
tccagggagcagaagccttttaaggcccagtacatgctggtggttcacatgaggagacac
acgggggagaaaccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctg
gagaatctgaagacccacctgcgatctcacaccggggaaaaaccatatgtgtgtgaccac
gagggatgcaacaaagccttctccaacgcctcggacagagccaagcaccagaaccgcaca
cactccaacgagaaaccctacgtgtgtaaagtccccgggtgtacaaagcgctacacggac
cccagctctctcaggaagcacgtgaagacagtccacggaccagaggcccacgtcaccaag
aaacagcgcagcgacgtaccgcccagcagacccatgccacccaaagagaatggagagaac
gagacaggccggggcatggaggagaagatggacagcacctcgagaggtacggaggactac
ctccaggccacgtctatcaagacggagaactctgtgatgtatcagtccagccctggtggt
cagtcgtcatgtagcagcgagccgtcgccacttggcagttccaccaaccatgacagtgga
gtagagatggccctccacagcagcgggggaagcatgggggacctgactgggctggacgac
ccctcagggcccctcatggactcctccttctctggcctctggtctgggacagcaggggtc
ggggtgggcctccacctccgtcaacacctaggcctcagccacatccacagactagaacac
ctgaagaaggagaaactgaagactgtgagggactcctgccagtgggctaatcatcatcca
tctcctccagtccagaacaccaagctaccgcccataccagtaagcgggtcccttctggag
agaggaaatatggatggtgggcctggatcgttcctcagcctcagtgagctgtgttccagt
aaggtgactgtcctgaaccagctggaccatctgatggagcgcagggacagcgctaccagc
accgtctcctctgcatacatcagccggcgctcctctggcatctccccctgccactacagc
cgccgttccagcgacgcctccacgttcagtggccaccgccaccacaacatcagttccacc
ggctcctacgaccccatctctacagacctgtcccggaggtccagcaacgccagccagagt
ggaggagggggagggctgcccagtcacctcagcctcacccccgcccagcactaccacctc
aaggctaaatatgcggcggctacaggcggagccccacccacacctctacccaacatggag
aggatgagtctcaagacctgcatggccctctacagggatgcttcccagggagactcgttg
tctggttactcctccttcaaccccattgcccccagtggtgttcccaggcgctgcagcggc
gatatgggaggctataacggccgcagcatgatgccccacgaagctccgtccaacattccc
cgtcgggctagcgaccccgtcccccgaccgctgcccctggacccgttgtcccatcagcct
caggtgcagcgctacaacagcacgggcaacatgcagaatctccacccacacgcctcccag
cccaaccaggccccgtctgcagccgagcggcgccacctggcgccccagagccaccagccg
cgctccgacagcagtctgcagcgatacccttactgcccccggccgcccagcatctctgag
aacgtggccatggagaccatggccggcgacatgagcggtagtcgcaacaacagtgaggag
gagatgatggtacttccggatgacgtcgttcactacatcgcctctcagggcggagctgga
gagtcagactgtgccaacgggtacaaccgacaagcacaatgtggtttccgtggaaacaca
ataaaccctaacccccagcagaaacagcagttttaccaccagcaaaggatggctgtggtg
gacaccaatatgaatatgaacccctcgtctgcaccacaaaccatgcccctcttctgtgcc
ctaagctcaggcaatccgcaacagtctttcccctccttacccagtaagacaagcaccatg
ccggtgcagtggaacgaggtcagctcaggtactgtggaagctcttcacaacccaagtcaa
cagctgccgttcggtcgaagcaacccaaacctcgccatggtccaacagaaacagaacttt
gtctcgttccagaatcagaatcttaactccaaccaacacattgcacagatgatccacaac
ctggctcacgcagcccagcaggggagatacatagagctgcagaaggcggactcgaggctg
agctgtgtccagcaacagagcctacagcaacagcagcccgctaatgctaacctcaatgaa
ccagtgagtctcgggcatgggtttaaccagggtcttggtcctagcgatgctaccgctaac
gcgaaccagcggtcctcctgtagtagtatggcagttggtggcactctgcgtaagttgagc
caaaacagtaaacaacaacagacggtgcacactgtagacacgcagaacagccggctgggg
gcgcagccaggggggagtcaatcgtctcaagtcacatttaaggatagcggtgtgaattct
tcgcggatgatctcacagaagtataatatagcgtcccaggttcagcttcccatccaaaat
ggaggtcaaatactcctccagccaaggccgcccacagaacctaagtctctaagcaaacag
cattcagggtcaatgacaatgcagcgacaaaactcaattggcaatcactgcagcaatggc
aacaacaaggacagcaatgttatgtactacacaggacagatacacgtgtttgagccaaac
ggaaacgtcaacatgcagatgatggcatcatcagtagtggacgttcttcaatgtccctca
gacagcaccgagaccgccatgacctcaccgggagtaagcaaccaggtctccagtacggtg
gactcgtccaatgggacaggggcagaggagccccagattgactttgacaccatgctggat
gacggggaccactccagcctgatgtcaggcaccatcagccccagtatcctccagagtctg
tcccagacctcctccagactcaccaccccccggaactctgtcaccctgccctccctgccc
ctccctgcagggggaagcaacatggccatcggcgatatgagctccctgctcaccgcgctt
gcagaagagaacaagttcctcaacatgatgtcataa
DBGET
integrated database retrieval system
